GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1326 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; 80 and 90% fat with small portion of fibrous tissue, no ductal elements
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1426 |
Prostate
|
PAXgene |
1
|
2 pieces; fibromuscular stroma with glands and many corpora amylacea
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1526 |
Skin, leg
|
PAXgene |
0
|
6 pieces; few contain significant attached adipose tissue (up to 50%), one lacks epidermis in this section, elsewhere epidermis measures about 29 microns
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 1 piece is ~90% fat/10% fibrous, 2nd is ~50% fat/50% fibrous and vessels
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; fat and fibrous tissue, not nerve
|
Unacceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; 1 piece includes ~70% attached fat
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0126 |
Spleen
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; multinodular goiter
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0326 |
Aorta
|
PAXgene |
0
|
6 pieces; several include residual attached fat
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0426 |
Heart
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0526 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; includes minimal fat
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; predominantly fat and portion of myocardium, minimal artery (<10%)
|
Unacceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0726 |
Lung
|
PAXgene |
1
|
2 pieces; includes portion of larger bronchi/vessels/cartilage (not target), bronchopneumonia, some thickening of basement membrane and smooth muscle hypertrophy
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces (fragmented); focal inflammatory cells in epithelial layer
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis with residual attached mucosa in one piece, and attached fibrovascular and fatty tissue with suture material
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1126 |
Stomach
|
PAXgene |
2
|
6 pieces; 2 are mucosa only, 4 include variable amounts of muscularis
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1226 |
Omentum
|
PAXgene |
0
|
2 pieces; adipose tissue, central defect in 1 piece
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1326 |
Pancreas
|
PAXgene |
1
|
2 pieces; includes about 20-30% internal and external fat, lymphoid aggregate, islets are numerous/well visualized
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1426 |
Ileum
|
PAXgene |
1
|
5 pieces; predominantly mucosa with rare lymphoid follicle
|
Unacceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections of colon
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1626 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces; target muscularis with small attachment of fat/vessels
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1726 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; mostly fat with <10 and 25% fibrocollagenous tissue with scattered duct and lobules
|
Acceptable
|
|
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1826 |
Uterus
|
PAXgene |
0
|
6 pieces; myometrium only in this section
|
Acceptable
|
|