GTEX-13X6K
|
61-70
|
Female
|
GTEX-13X6K-2626 |
Ileum
|
PAXgene |
3
|
4 piecesm glandular mucosa sloughed; residual lymphoid elements ~30% of tissue, delineated
|
Acceptable
|
|
GTEX-13YAN
|
61-70
|
Male
|
GTEX-13YAN-2726 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa autolyzed; residual lymphoid aggregates delineated; ~15% total tissue
|
Acceptable
|
|
GTEX-1445S
|
61-70
|
Male
|
GTEX-1445S-2526 |
Ileum
|
PAXgene |
3
|
3 pieces, mucosa autolyzed completely; ~5-10% residual lymphoid aggregates; rep delineated
|
Acceptable
|
|
GTEX-144FL
|
51-60
|
Male
|
GTEX-144FL-2026 |
Ileum
|
PAXgene |
3
|
4 pieces, no viable mucosa
|
Unacceptable
|
|
GTEX-144GL
|
51-60
|
Male
|
GTEX-144GL-2626 |
Ileum
|
PAXgene |
2
|
4 pieces; lymphoid-rich specimens
|
Acceptable
|
|
GTEX-144GM
|
21-40
|
Male
|
GTEX-144GM-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, lymphoid aggregates are ~20-30%, good specimen
|
Acceptable
|
|
GTEX-144GN
|
51-60
|
Male
|
GTEX-144GN-1326 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 have abundant lymphoid tissue, but all have muscularis propria. LCM
|
Unacceptable
|
|
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2326 |
Ileum
|
PAXgene |
3
|
4 pieces; good lymphoid component, but severe autolysis, small portion of muscularis (not target)
|
Unacceptable
|
|
GTEX-145LS
|
61-70
|
Female
|
GTEX-145LS-2826 |
Ileum
|
PAXgene |
3
|
4 pieces; insufficient lymphoid tissue
|
Unacceptable
|
|
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, lymphoid aggregates (rep delineated)are ~30% of specimen, well preserved
|
Acceptable
|
|
GTEX-145LU
|
41-50
|
Male
|
GTEX-145LU-2326 |
Ileum
|
PAXgene |
2
|
4 pieces; lymphoid nodules present, but somewhat autolyzed
|
Acceptable
|
|
GTEX-145LV
|
51-60
|
Male
|
GTEX-145LV-1926 |
Ileum
|
PAXgene |
1
|
6 pieces; full thickness of colon sampled, NOT ileum
|
Unacceptable
|
|
GTEX-145ME
|
41-50
|
Female
|
GTEX-145ME-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved; lymphoid aggregates 30-40% of tissue, rep delineated
|
Acceptable
|
|
GTEX-145MF
|
41-50
|
Male
|
GTEX-145MF-2426 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosal glandular elements totally autolyzed; ~20% of tissue is residual lymphoid aggregates, rep. delineated
|
Acceptable
|
|
GTEX-145MG
|
51-60
|
Male
|
GTEX-145MG-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; mucosa autolyzed, but abundant lymphoid tissue still intact; well dissected
|
Acceptable
|
|
GTEX-145MH
|
51-60
|
Male
|
GTEX-145MH-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; fragments of autolyzed mucosa with some lymphoid nodules and muscularis (not target)
|
Unacceptable
|
|
GTEX-145MI
|
61-70
|
Female
|
GTEX-145MI-2026 |
Ileum
|
PAXgene |
3
|
4 pieces; too autolyzed
|
Unacceptable
|
|
GTEX-145MN
|
21-40
|
Male
|
GTEX-145MN-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; 5 have abundant mucosal lymphoid tissue, but 5 have muscularis (not target). LCM
|
Unacceptable
|
|
GTEX-145MO
|
61-70
|
Male
|
GTEX-145MO-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, autolyzed mucosa. Correct target but only trace residual lymphoid elements, no target aggregates remain, not viable GTEx specimen
|
Unacceptable
|
|
GTEX-146FH
|
51-60
|
Female
|
GTEX-146FH-2326 |
Ileum
|
PAXgene |
2
|
4 pieces; minimal lymphoid tissue
|
Unacceptable
|
|
GTEX-146FQ
|
21-40
|
Male
|
GTEX-146FQ-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; lymphoid nodules on 3 pieces (outlined); but most is muscle and fat. LCM
|
Unacceptable
|
|
GTEX-146FR
|
61-70
|
Female
|
GTEX-146FR-2326 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates less than 5%
|
Unacceptable
|
|
GTEX-14753
|
61-70
|
Male
|
GTEX-14753-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; sparse lymphoid nodules [annotated] in autolyzed mucosa; LCM
|
Unacceptable
|
|
GTEX-1477Z
|
61-70
|
Male
|
GTEX-1477Z-1326 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosal elements sloughed, resdiual lymphoid aggregates are ~20-30%, rep foci delineated
|
Acceptable
|
|
GTEX-147F3
|
51-60
|
Female
|
GTEX-147F3-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; colonic mucosa with few lymphoid nodules
|
Unacceptable
|
|