GTEX-12WSI
|
51-60
|
Male
|
GTEX-12WSI-2026 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular epithelial elements markedly autolyzed, hyperplastic pattern
|
Acceptable
|
 |
GTEX-12WSM
|
61-70
|
Male
|
GTEX-12WSM-1226 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular component in one section badly autolyzed; may be partially seminal vesicle
|
Acceptable
|
 |
GTEX-12WSM
|
61-70
|
Male
|
GTEX-12WSM-1426 |
Colon, sigmoid
|
PAXgene |
3
|
3 pieces ~10% 'contaminant'
mucosa, totally autolyzed
|
Acceptable
|
 |
GTEX-12WSM
|
61-70
|
Male
|
GTEX-12WSM-1526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.4mm thick, but glandular component totally autolyzed
|
Acceptable
|
 |
GTEX-12WSM
|
61-70
|
Male
|
GTEX-12WSM-1626 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa autolyzed, lymphoid aggregates are ~15-20% total
|
Acceptable
|
 |
GTEX-12ZZW
|
51-60
|
Male
|
GTEX-12ZZW-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa totally autolyzed
|
Acceptable
|
 |
GTEX-12ZZW
|
51-60
|
Male
|
GTEX-12ZZW-2626 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular component markedly autolyzed
|
Acceptable
|
 |
GTEX-12ZZW
|
51-60
|
Male
|
GTEX-12ZZW-2726 |
Ileum
|
PAXgene |
3
|
5 pieces; mucosa autolyzed but lymphoid aggregates remain, ~10-15% total tissue
|
Acceptable
|
 |
GTEX-12ZZX
|
41-50
|
Female
|
GTEX-12ZZX-1626 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
 |
GTEX-12ZZX
|
41-50
|
Female
|
GTEX-12ZZX-1826 |
Pancreas
|
PAXgene |
3
|
2 pieces, severe saponification/autolysis
|
Acceptable
|
 |
GTEX-12ZZX
|
41-50
|
Female
|
GTEX-12ZZX-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa badly autolyzed, lymphoid aggregates remain, ~10% tota tisssue
|
Acceptable
|
 |
GTEX-12ZZX
|
41-50
|
Female
|
GTEX-12ZZX-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa completely autolyzed/sloughed
|
Acceptable
|
 |
GTEX-12ZZY
|
61-70
|
Male
|
GTEX-12ZZY-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; mucosal epithelium totally autolyzed; lymphoid aggregares persist, up to ~30% of 2 sections
|
Acceptable
|
 |
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis and 30 & 50% internal fat
|
Unacceptable
|
 |
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2026 |
Prostate
|
PAXgene |
3
|
2 pieces; glands largely autolyzed, fibromuscular stroma slightly autolyzed
|
Acceptable
|
 |
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa completely autolyzed; muscularis intact and mildly autolyzed
|
Acceptable
|
 |
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2626 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; mucosa largely sloughed; several submucosal glands annotated for possible LCM study
|
Acceptable
|
 |
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2826 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa completely autolyzed, no muscularis propria present
|
Unacceptable
|
 |
GTEX-13112
|
51-60
|
Male
|
GTEX-13112-1326 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa severely autolyzed, muscularis only slightly autolyzed
|
Acceptable
|
 |
GTEX-13112
|
51-60
|
Male
|
GTEX-13112-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces; some areas have less autolysis, '2'; 10 and 40% internal fat; limited value
|
Acceptable
|
 |
GTEX-13112
|
51-60
|
Male
|
GTEX-13112-2226 |
Prostate
|
PAXgene |
3
|
2 pieces; glands autolyzed; stroma better preserved; 1 piece partially contains prostatic urethra [annotated] and associated structures
|
Acceptable
|
 |
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2026 |
Pancreas
|
PAXgene |
3
|
2 pieces, severe autolysis/saponification
|
Acceptable
|
 |
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2226 |
Ileum
|
PAXgene |
3
|
4 pieces, fragmented muscularis and severely autolyzed mucosa, no residual lymphoid tissue
|
Unacceptable
|
 |
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, severely autolyzed mucosa and muscularis
|
Unacceptable
|
 |
GTEX-1314G
|
21-40
|
Male
|
GTEX-1314G-1426 |
Prostate
|
PAXgene |
3
|
2 pieces.
|
Acceptable
|
 |