GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1226 |
Prostate
|
PAXgene |
1
|
2 pieces. Not target prostate; seminal vesicle
|
Unacceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1326 |
Testis
|
PAXgene |
1
|
2 pieces. Not testis. Stromal tissue of unknown provenance.
|
Unacceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis. ~15-20% 'contaminant' mucosa present, rep delineated
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~0.4mm, 15-20% thickness
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates up to ~25% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1726 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces (fragmented), target glandular elements ~70% of tissue, delineated; rest is stroma
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1826 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces. mainly adipose, trace fibrous elements
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, moderate dermal fat, rep delineated; squamous epithelium is ~40-50 microns
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-2026 |
Skin, leg
|
PAXgene |
0
|
6 pieces, adherent/dermal fat, moderate, squamous epithelium is ~50-6- microns
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-2126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, interstitial fascia is ~10%
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-2226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, adherent/interstitial fat/vascular elements is ~20% of tissue
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-2326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace nubbin of adherent fat, ~0.5mm
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-2426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, adherent rims of fibrous tissue/fat up to ~1mm
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0126 |
Spleen
|
PAXgene |
1
|
2 partly fragmented pieces; capsule present on 1 edge [labeled]
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; minimal plaque; 4 pieces have hemorrhage in adventitia up to 2mm thick
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 1 fragmented; ducts and lobules present
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0426 |
Skin, suprapubic
|
PAXgene |
0
|
4 pieces; well trimmed; dermal fat 5%
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0526 |
Uterus
|
PAXgene |
1
|
2 pieces; proliferative endometrium 10%, with endometrial hyperplastic polyp, 30%; myometrium comprises 60%
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0626 |
Ovary
|
PAXgene |
1
|
2 pieces; variety of cysts: follicular, corpus luteum, albicans
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0726 |
Omentum
|
PAXgene |
0
|
1 + 2 small pieces; low fibrous content
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces; 10% internal fat
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
5 pieces; 2 with prominent submucosal glands [10%][arrowed]
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis except for a 0.4mm focus of epithelium in 1 [circled]
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; gastric mucosa and muscularis
|
Unacceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-1226 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed, muscularis intact
|
Acceptable
|
 |