GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-0926 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1026 |
Pancreas
|
PAXgene |
3
|
2 pieces, severe saponification, Islets not well seen
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis, switch with 1225
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa, switch with 1125
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, ~10% "contaminant" mucosa
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1426 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosal markedly autolyzed/sloughed
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1526 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces 4 (encircled) show glomeruli (rep ensquared), 2 with tubules only--may be artfiact of sectioning
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1626 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, ~50% cortical parenchyma (delineated), rest adherent/insterstitial fat
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1726 |
Ileum
|
PAXgene |
3
|
4 pieces, mucoasa autolyzed, rep lympohid aggregated delineated, ~15-20% total
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa markedly autolyzed
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, >50% mucosa, incorrect target for sigmoid colon for GTEx purposes
|
Unacceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2026 |
Prostate
|
PAXgene |
3
|
2 pieces, moderate chronic prostatitis; glandular epithelium moderately - severely autolyzed
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2126 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis is present
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2226 |
Skin, leg
|
PAXgene |
0
|
2 pieces, minimal dermal fat; squamous epithelium is ~40-50 microns
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fibrofascial tissue, rep delineated
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2426 |
Artery - tibial
|
PAXgene |
0
|
4 pieces, clean specimens; no adherent fat
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, partial rim of adherent fat, ~.3mm, generally clean specimens
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2626 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, ~20% adherent connective tissue (delineated) rest is glandular parenchyma; good specimens
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~5% interstital fat, delineated; 2-3mm nubbin of tendon, delineated
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2826 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2926 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, no abnnormalities; incidental dura/vessels, delineated, in one section
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-3026 |
Pituitary gland
|
PAXgene |
1
|
1 piece, adenohypophysis
|
Acceptable
|
|
GTEX-132NY
|
51-60
|
Male
|
GTEX-132NY-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no dermal fat, squamou epithelium is ~50 Microns
|
Acceptable
|
|
GTEX-132NY
|
51-60
|
Male
|
GTEX-132NY-0226 |
Testis
|
PAXgene |
2
|
2 pieces, focal infarcts; Leydig cells well seen, (rep delineated)
|
Acceptable
|
|
GTEX-132NY
|
51-60
|
Male
|
GTEX-132NY-0326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat, squamous epithelium is ~40-50 microns
|
Acceptable
|
|