GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; ~5% and 15% internal fat
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1426 |
Coronary artery
|
PAXgene |
1
|
2 pieces; eccentric fibrosclerotic plaque with calcification (arrow) and with narrowing of the lumen by 60%; narrow rim of adventitia and fat
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis; 3 of 6 pieces with attached adventitia (outlined)
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, well trimmed target muscularis
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; ~0.4 mm thick squamous epithelium; many submucosal glands
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1826 |
Stomach
|
PAXgene |
2
|
6 pieces; one piece lacks surface mucosa; focal superficial mucosal fresh hemorrhage (rep arrows)
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1926 |
Prostate
|
PAXgene |
1
|
2 pieces; fibromuscular stroma and glandular structures
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; dense fibrous stroma and ductal structures consistenet with gynecomastoid stromal and ductal hyperplasia
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with up to 1.4 mm attached adventitia
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-2226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 4 of 6 pieces contain 5% to 20% subcutaneous/dermal fat (outlined)
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-2326 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis preserved
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; focally moderate autolysis; superficial multifocal mucosal fresh hemorrhage (rep arrows)
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately and focally severely autolyzed mucosa; well representaion of target lymphoid aggregates
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0126 |
Spleen
|
PAXgene |
0
|
2 pieces; 1 piece includes capsule (target is 5mm below capsule)
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0226 |
Thyroid gland
|
PAXgene |
0
|
2 pieces; 1 piece includes small attachment of fat/vessels
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0326 |
Lung
|
PAXgene |
0
|
2 pieces; includes pleura (target is 1 cm below pleura), emphysematous change
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0426 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; muscularis, not mucosa; single focus of submucosal glands and detached fragment of squamous epithelium
|
Unacceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0526 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; target muscularis with some attached fat/vessels/nerve
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; muscularis with significant component of squamous and gastric mucosa with hemorrhage and ulcer
|
Unacceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0726 |
Stomach
|
PAXgene |
1
|
6 pieces; full thickness sections, some superficial hemorrhage
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0826 |
Omentum
|
PAXgene |
0
|
2 pieces; mature adipose tissue, several detached fragments of glands/carryover
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0926 |
Pancreas
|
PAXgene |
1
|
2 pieces; 40 and 50% fat
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1026 |
Ileum
|
PAXgene |
1
|
6 pieces; full thickness colon, not ileum
|
Unacceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 1 of 6 includes portion of muscularis (not target)
|
Acceptable
|
|
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; predominantly mucosa (not target), with small proportion of muscularis
|
Unacceptable
|
|