GTEX-1BAJH
|
61-70
|
Male
|
GTEX-1BAJH-2826 |
Stomach
|
PAXgene |
2
|
6 pieces; moderately autolyzed gastric mucosa, muscularis slightly less autolyzed, 5 pieces are full thickness with only trivial muscularis in the 6th section
|
Acceptable
|
|
GTEX-1BAJH
|
61-70
|
Male
|
GTEX-1BAJH-3026 |
Brain - cortex
|
PAXgene |
2
|
2 pieces; both covered by meninges (arrows), mild to moderate autolysis
|
Acceptable
|
|
GTEX-1BAJH
|
61-70
|
Male
|
GTEX-1BAJH-3126 |
Brain - cerebellum
|
PAXgene |
2
|
2 pieces; Purkinje cells observed, mild to moderate autolysis
|
Acceptable
|
|
GTEX-1C2JI
|
51-60
|
Male
|
GTEX-1C2JI-1526 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and abundant muscularis (not target) with only focal/minimal lymphoid tissue
|
Unacceptable
|
|
GTEX-1C2JI
|
51-60
|
Male
|
GTEX-1C2JI-1626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; fragments of muscularis with some, largely autolyzed, residual mucosa
|
Acceptable
|
|
GTEX-1C2JI
|
51-60
|
Male
|
GTEX-1C2JI-1726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; mostly full thickness sections of colon, moderate autolysis
|
Acceptable
|
|
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-0926 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponfication in some foci; Islets stiil visible ( rep encircled), beginning to degrade
|
Acceptable
|
|
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, squamous mucosa up to ~0.5mm, beginning to slough; submucosal mucus glands, delineated
|
Acceptable
|
|
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1926 |
Testis
|
PAXgene |
2
|
2 pieces spermatogenesis appears adequate
|
Acceptable
|
|
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa up to ~0.3mm, moderately autolyzed
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1026 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; some interstitial fibrosis
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1126 |
Lung
|
PAXgene |
2
|
2 pieces; includes pleura (not target), severe congestion with intra-alveolar hemorrhage
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1526 |
Pancreas
|
PAXgene |
2
|
2 pieces; 30% and 5% internal fat; fairly prominent islets (rep outlined), moderate to severe autolysis
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2026 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately and focally severly autolyzed adrenal cortex; 90% and 40% external fat
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; congested renal cortex, arteriosclerosis (rep outlined), small amount of fat attached to 3 of 6 pieces (arrows)
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; few include autolyzed mucosa (outlined), muscularis is better preserved
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and too few (mostly autolyzed) lymphoid aggregates to warrant analysis (outlined), muscularis is also present (not target)
|
Unacceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2526 |
Stomach
|
PAXgene |
2
|
6 pieces; moderately to severely autolyzed gastric mucosa, muscularis is better preserved
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2726 |
Prostate
|
PAXgene |
2
|
2 pieces; moderate to severe glandular autolysis with abundance of coropora amylacea
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2826 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis present but decreased; congestion
|
Acceptable
|
|
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-3226 |
Pituitary gland
|
PAXgene |
2
|
1 piece; mildly to moderately autolyzed adenohypophysis and neurohypophysis
|
Acceptable
|
|
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-2026 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular elements with autolysis ranging from score 1 to score 3
|
Acceptable
|
|
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-2126 |
Testis
|
PAXgene |
2
|
2 pieces, moderately autolyzed; spermatogenesis appears reduced
|
Acceptable
|
|
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-2226 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~0.6mm, moderately advanced autolysis
|
Acceptable
|
|
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-2526 |
Ileum
|
PAXgene |
2
|
6 pieces, ~30% target lymphoid aggregates, rep delineated;glandular elements of mucosa largely autolyzed
|
Acceptable
|
|