GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1326 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5% vascular elements; rep delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~1.2mm, ~40-60% thickness. Basal microglandular dilation encircled, destruction of chief cells predominately, unusual pattern
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1526 |
Uterus
|
PAXgene |
1
|
2 pieces, myometrium. Trace basalis endometrial stroma, delineated, no glandular elements
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1626 |
Ovary
|
PAXgene |
1
|
2 pieces, post menopausal atrophy/involutional changes
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.17mm, 10-15% thickness
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1826 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous epithelium is ~0.22mm, ~5-10% thickness
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent nubbins of fat, 1-2mm, rep delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, colonic mucosa, unknown site, not GTEx target tissue
|
Unacceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-2126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~ 0.5mm, ~10-15% thickness
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-2226 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-2326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, cortex, nubbins of adherent fat up to ~1-2mm
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; adrenal cortex and ~5% attached external fat
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0226 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0326 |
Skin, leg
|
PAXgene |
1
|
6 pieces; ~5% to 10% dermal fat
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0426 |
Adipose tissue
|
PAXgene |
1
|
5 pieces; two larger pieces consist of fibrovascular component and 5% and 60% mature adipose tissue; 2 of 3 smaller pieces represent fibrovascular tissue; the remaining one consists of adipose tissue with small fibrovascular component and adnexal ducts (outlined)
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; well trimmed
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; up to 0.6mm rim of adventitia and one small fragment of attached skeletal muscle (outlined)
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; essentially well trimmed
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces; ~5% external fat; well preserved parenchyma with Langerhans islets; mildly autolyzed fat
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; no pathologic changes
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1026 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1126 |
Heart
|
PAXgene |
1
|
2 pieces; mild interstitial fibrosis ; fatty streaks consistent with fatty degeneration (rep arrows)
|
Acceptable
|
|
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-1226 |
Aorta
|
PAXgene |
1
|
6 pieces; up to 0.7mm attached adventitia; no atherosclerosis
|
Acceptable
|
|