GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well dissected; <2% dermal fat
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0226 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; sliver of tendon in 1 piece, 2% of area [arrowed]
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; well trimmed; 5 & 10% internal & external fat
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; well trimmed, no extraneous tissues; no lesions
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0526 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 20% fibrous content in 1 piece, 5% in other
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0626 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces; 1 piece is a well dissected gland with no lesions; other piece is 90% skin of lip; LCM
|
Unacceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0726 |
Thyroid gland
|
PAXgene |
0
|
2 pieces; well trimmed; no lesions
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0826 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; up to 40% adventitial stromal content
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0926 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; well dissected; mild to moderate squamous hyperplasia with focal lymphoid aggregates consistent with gastric reflux; no submucosal glands
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1026 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; well dissected; no lesions
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1126 |
Stomach
|
PAXgene |
1
|
6 pieces; well dissected, full thickness gastric mucosa and muscularis
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1226 |
Omentum
|
PAXgene |
0
|
2 pieces; 1 piece with 10% fibrovascular content, other with <1% such content
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, 5 with abundant lymphoid (target) tissue, but all with full thickness (non-target) muscularis; LCM
|
Unacceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa is main site of mild to moderate autolysis; muscle is intact
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected except for several foci of mucosa on 2 of 6 pieces, occupying 5%; arrowed
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1626 |
Testis
|
PAXgene |
1
|
2 pieces, 1 fragmented; active spermatogenesis
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1726 |
Prostate
|
PAXgene |
1
|
2 pieces; well preserved; no lesions
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; several hair follicles; well trimmed; 1% dermal fat
|
Acceptable
|
 |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, well trimmed skeletal muscle
|
Acceptable
|
 |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; 10 to 25% internal (periadnexal) fat; trace of external fat (outlined); ~47 micron thick epidermis
|
Acceptable
|
 |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue and septal fibrous component (arrows)
|
Acceptable
|
 |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0426 |
Prostate
|
PAXgene |
2
|
2 pieces; glandular component moderately autolyzed with sloughed lining epithelium; fibromuscular stroma; focal calcifications (arrows);
|
Acceptable
|
 |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0526 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present
|
Acceptable
|
 |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; congested adventitia measures up to 0.88mm
|
Acceptable
|
 |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 10% and 15% external fat (outlined) and ~10% internal fat (arrow)
|
Acceptable
|
 |