GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 2 mm nubbin of fat/vessel on one aliquot, delineated
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0226 |
Aorta
|
PAXgene |
1
|
6 pieces, ~2mm layer of adherent fat/serosa/vasa vasoroum on all, delineated (rep)
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis, adherent nubbins of fat on most, rep ones delineated
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, all contain squamous mucosa, ~10-20% thickness. Few submucosal mucus glands present, rep ones delineated
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0526 |
Omentum
|
PAXgene |
1
|
2 pieces, ~10 fiborvacular tissue, rep areas delineated
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, predominantly muscularis, trace squamous mucosalr remnants present in 4, delineated
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0726 |
Colon, transverse
|
PAXgene |
2
|
5 pieces small bowel; not a GTEx target organ
|
Unacceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0826 |
Stomach
|
PAXgene |
1
|
6 pieces. Mucosa is discontinuous but where present is well-preserved, ~20-30% thickness
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0926 |
Ileum
|
PAXgene |
1
|
5 pieces, lymphoid aggregates well-sampled, ~20-25% total
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, well preserved, ~50% muscularis, the rest fat and mucosa, ~10% thickness
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~50% fibrovascular elements, rep. areas delineated
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1226 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fat ~0.3mm
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1326 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, good clean specimens, no atherosis noted
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1426 |
Skin, leg
|
PAXgene |
0
|
6 pieces. Squamous epithelium is ~1.5-2% thickness; minimal dermal fat
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1526 |
Heart
|
PAXgene |
0
|
2 pieces, no ischemic changes
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1626 |
Coronary artery
|
PAXgene |
0
|
2 pieces, both with rims of 1-2mm adherent fat, early luminal atherotic deposits noted ~0.1-0.2mm
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat/vessels, delineated; incident Pascinian corpuscle noted, ensquared
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces. Squamous epithelium is ~1.5% thickness. Minimal dermal fat.
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-1926 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, adipose and fibrous tissue (delineated), no ductal elements present
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-2026 |
Testis
|
PAXgene |
1
|
2 pieces, well preserved; spermatogenesis is present
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-2126 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, ~80% glandular tissue, delineated, good specimens
|
Acceptable
|
|
GTEX-ZT9W
|
51-60
|
Male
|
GTEX-ZT9W-0126 |
Adrenal glands
|
PAXgene |
1
|
3 pieces, largest has 20% internal fat
|
Acceptable
|
|
GTEX-ZT9W
|
51-60
|
Male
|
GTEX-ZT9W-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-ZT9W
|
51-60
|
Male
|
GTEX-ZT9W-0326 |
Aorta
|
PAXgene |
1
|
6 pieces. well trimmed. no plaques
|
Acceptable
|
|
GTEX-ZT9W
|
51-60
|
Male
|
GTEX-ZT9W-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces. 1 with 30% fibrofatty plaque.
|
Acceptable
|
|