GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1026 |
Thyroid gland
|
PAXgene |
2
|
2 pieces
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1126 |
Liver
|
PAXgene |
2
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1426 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; oversized
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1526 |
Spleen
|
PAXgene |
2
|
2 pieces; oversized, congestion
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; renal cortex (target) and medulla (not target), arteriosclerosis
|
Unacceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1726 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; includes portion of muscularis, few dilated glands
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1826 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-1926 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; target muscularis, some residual attached fat
|
Acceptable
|
|
GTEX-1A8G7
|
61-70
|
Male
|
GTEX-1A8G7-2326 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly target muscularis with focus of autolyzed mucosa
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1226 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed; muscularis (present in 5 of 6 pieces) moderately autolyzed
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all contain mucosa and submucosa as well as variable amounts of muscularis; sample is of limited value; LCM
|
Acceptable
|
|
GTEX-1AMEY
|
21-40
|
Female
|
GTEX-1AMEY-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; variable amounts of mucosa sampled
|
Acceptable
|
|
GTEX-1AX8Z
|
51-60
|
Male
|
GTEX-1AX8Z-2226 |
Stomach
|
PAXgene |
2
|
6 pieces: 2 without muscularis; chronic gastritis
|
Acceptable
|
|
GTEX-1AX8Z
|
51-60
|
Male
|
GTEX-1AX8Z-2426 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 30% external fat
|
Acceptable
|
|
GTEX-1AX8Z
|
51-60
|
Male
|
GTEX-1AX8Z-2626 |
Prostate
|
PAXgene |
2
|
2 pieces; stroma well preserved
|
Acceptable
|
|
GTEX-1AX8Z
|
51-60
|
Male
|
GTEX-1AX8Z-2826 |
Testis
|
PAXgene |
2
|
2 pieces; greatly reduced spermatogenesis
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-0826 |
Lung
|
PAXgene |
2
|
2 pieces; moderate vascular congestion and alveolar exudates with patchy emphysema
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-1926 |
Spleen
|
PAXgene |
2
|
2 pieces; moderate congestion
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-2126 |
Stomach
|
PAXgene |
2
|
6 pieces; variable preservation of mucosa: superficial glands more autolyzed than deeper
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-2326 |
Prostate
|
PAXgene |
2
|
2 pieces: 1 is all stroma; other contains glands which are largely autolyzed; stroma preserved
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-2526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; arterial nephrosclerosis with moderate scarring
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed; muscularis intact
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; well dissected lymphoid tissue, but autolysis and admixture with adjacent muscle limit usefulness
|
Acceptable
|
|
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-3126 |
Pituitary gland
|
PAXgene |
2
|
1 piece; adenohypophysis makes up 2/3 and is moderately autolyzed; neurohypophysis [circled] is better preserved
|
Acceptable
|
|
GTEX-1AX9J
|
61-70
|
Male
|
GTEX-1AX9J-0626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, ~50% target, all cortex, moderately autolyzed; rest is adherent fat
|
Acceptable
|
|