GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, 3 with mucosa (not target) and no muscle (target), 3 comprised of muscle
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; muscle only, no mucosa present
|
Unacceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, 5 of 6 contain mucosa (not target), muscularis (target) present in 4
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1526 |
Ileum
|
PAXgene |
0
|
6 pieces, all containing muscularis (not target), lymphoid nodules demarcated
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, each with ~10% fibrous stroma, one with a prominent vessel
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1826 |
Skin, leg
|
PAXgene |
0
|
6 pieces, 3 with up to 10% adipose tissue
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1926 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, each with a rim of adipose tissue, up to 1.4mm in thickness on one. Fat comprises ~15% of one piece and ~35% of the other.
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2026 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, well-trimmed
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, one with ~10% internal adipose tissue, the second with 10-20% internal adipose tissue
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2226 |
Prostate
|
PAXgene |
0
|
2 pieces, one with nodular hyperplasia, glands comprise ~10%; other with stroma and strip of urothelium
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2326 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, well-trimmed
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2426 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis present
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, poorly fixed with central cavity, both with ~10% fibrous tissue, no ductal elements
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, all with small amounts of attached adipose tissue, up to 10%
|
Acceptable
|
|
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-2726 |
Coronary artery
|
PAXgene |
1
|
3 pieces, two of artery with narrowing of the lumen due to atheroma, both have small amount of attached adipose tissue. Small fragments of nerve also present.
|
Acceptable
|
|
GTEX-ZAKK
|
61-70
|
Male
|
GTEX-ZAKK-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces. All 6 are poorly trimmed with up to 2.5 mm of subcutaneous fat (half the total thickness of the specimen).
|
Acceptable
|
|
GTEX-ZAKK
|
61-70
|
Male
|
GTEX-ZAKK-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces. Both pieces contain large amounts of dense fibrous tissue, probably fascia: 90% of 1 and 60% of other.
|
Unacceptable
|
|
GTEX-ZAKK
|
61-70
|
Male
|
GTEX-ZAKK-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces. Moderate atrophy with fibrosis and small vessel disease
|
Acceptable
|
|
GTEX-ZAKK
|
61-70
|
Male
|
GTEX-ZAKK-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces. Moderate to severe atherosclerosis with up to 90% occlusion.
|
Acceptable
|
|
GTEX-ZAKK
|
61-70
|
Male
|
GTEX-ZAKK-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces. Prominent (diabetic) small artery disease (thickening). Stromal fibrosis. Nerve fibers appear atrophic.
|
Acceptable
|
|
GTEX-ZDTS
|
61-70
|
Male
|
GTEX-ZDTS-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well trimmed of subcutaneous fat
|
Acceptable
|
|
GTEX-ZDTS
|
61-70
|
Male
|
GTEX-ZDTS-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; large vein =10% of 1 piece
|
Acceptable
|
|
GTEX-ZDTS
|
61-70
|
Male
|
GTEX-ZDTS-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-ZDTS
|
61-70
|
Male
|
GTEX-ZDTS-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|