GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces; ~40 microns thick epidermis; ~20% internal fat; well trimmed
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces;10% internal fat
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; one shows numerous medial calcifications (arrows) and fibrosclerotic plaque; other with attached up to 1.4mm fibrofatty stroma
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 0.8mm and 1.0 mm of attached external fat and connective tissue
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0626 |
Aorta
|
PAXgene |
0
|
6 pieces; attached adventitia up to 0.6mm
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0726 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 10% internal fat
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0826 |
Heart
|
PAXgene |
1
|
2 pieces: fat (arrows) and interstitial fibrosis with scarring (rep outlined); multifocal fiber eosinophilia
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0926 |
Coronary artery
|
PAXgene |
1
|
2 pieces; massive medial calcification and fibrosclerotic plaques with ~75% luminal compromise; focal red blood cell extravasation into the fibrosclerotic plaque (outlined); ~1mm attached external fat to one sample
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1026 |
Lung
|
PAXgene |
1
|
2 pieces; severe congestion; bronchial wall and desquamated bronchial epithelium and fragment of cartilage (outlined); anthracosis; thick walled pulmonary vessels (arrows); focal pleural coverage (outlined)
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1126 |
Thyroid gland
|
PAXgene |
0
|
2 pieces; no pathologic changes noted
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1226 |
Omentum
|
PAXgene |
1
|
2 pieces (one fragmented); lobulated mature adipose tissue with less than 5% fibrovascular component
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; ~ 5% internal (periadnexal) fat
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1426 |
Liver
|
PAXgene |
0
|
2 pieces; marked congestion
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; one represents 60% fat and 40% dense fibrous stroma with scattered ductal structures with focal hyperplasia; other predominantly adipose tissue and ~10% fibrous component with single ductal structure
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces; mildly periductal fibrosis (arrows); PanIN 1A changes in ducts
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1726 |
Spleen
|
PAXgene |
2
|
2 fragmented pieces; congestion; 1 mm floater of pancreatic tissue (outlined); sparse lymphoid tissue
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and a few scattered residual lymphoid aggregates (outlined) representing ~5% of tissue, too few to warrant analysis except for LCM
|
Unacceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and preserved muscularis on 3 of 6 samples (arrows)
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2026 |
Adrenal glands
|
PAXgene |
2
|
3 pieces; moderately autolyzed adrenal cortex with fatty degeneration and ~20% internal and external fat; two smooth muscle fragments (outlined)
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2126 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces, well trimmed target muscularis
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2226 |
Prostate
|
PAXgene |
1
|
2 pieces; fairly well preserved fibromuscular stroma and prostatic glandular component in 1 piece; not well preserved glands in the other
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2326 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; numerous variably sized simple cysts; renal cortex with severe arterio and arteriolonephrosclerosis and ~90% hyalinized glomeruli; focal tubular calcifications (outlined)
|
Unacceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis; small focus of submucosal gland (outlined)
|
Acceptable
|
|