GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; target mucosa up to ~0.2mm; glandular elements sloughed, lamina propria remains
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; nubbins of adherent fat up to ~1mm, prominent fibrosing mesothelial hyperplasia
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2626 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular elements with mild-moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; florid stromal and focal ductal (delineated) gynecomastoid hyperplasia
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece, adenohypophysis
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces (fragmented); no abnormalities
|
Acceptable
|
 |
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-3126 |
Brain - cortex
|
PAXgene |
1
|
4 pieces (fragmented); no abnormalities
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; ducts and stroma of gynecomastoid hyperplasia
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 10% stromal & vascular content in 1 piece
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well dissected; no dermal fat; single large hair complex in several pieces
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0426 |
Lung
|
PAXgene |
1
|
2 pieces; pulmonary edema & early pneumonia; no sign of chronic disease
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0526 |
Aorta
|
PAXgene |
1
|
6 pieces; minimal fibrous intimal thickening; well dissected
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 10% fibrous content
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0726 |
Heart
|
PAXgene |
1
|
2 pieces; extensive myocardial infarct with 50% of each sample affected showing intense hypereosinophilia with a rarefied border zone [annotated] LCM
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0826 |
Coronary artery
|
PAXgene |
1
|
4 pieces; extensive replacement of intima & media by fibrous & atheromatous, focally calcified, material, but lumen patent; up to 1.6mm perivascular intrimmed fat
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0926 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed; 10% dermal fat
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1026 |
Liver
|
PAXgene |
1
|
2 pieces; moderate increase in portal tract lymphocytes
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 10% fibrous content in one
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1226 |
Omentum
|
PAXgene |
1
|
2 partly fragmented pieces; 10% fibrous content in one
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1326 |
Pancreas
|
PAXgene |
2
|
2 pieces; minimal fat content
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis propria; several very small foci of skeletal muscle up to 0.05mmsq in 3 pieces [labeled], <1% area
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 3 pieces have 30% fatty stroma
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1826 |
Prostate
|
PAXgene |
2
|
2 pieces; stroma predominates (90%) over glands; glands autolyzed, stroma intact; 3.5mm 'cap' of fibroadipose vascularized tissue at end of 1 piece
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1926 |
Testis
|
PAXgene |
1
|
2 pieces; severely reduced mature spermatogenesis
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-2026 |
Muscle, skeletal
|
PAXgene |
1
|
2 partly fragmented pieces; minimal fat content
|
Acceptable
|
 |