GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1026 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibrous mastopathy. Rare atrophic duct/lobular units, rep delineated
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1126 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~1mm, ~20% of thickness; microcystic gland dilation with actue inflammation/cell necrosis in microcysts (based on review of glass slide; concurrence within PRC)
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1226 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, submucosal Mullerian rests with squamous metaplasia present, rep delineated
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, squamous epithelium up to ~50 microns; adherent dermal fat nubbins up to ~1mm, rep delineated
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1426 |
Ovary
|
PAXgene |
1
|
2 pieces, one largely hilum. Well-preserved oocyctes, rep. aggregates encircled; follicular cysts ensquared
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1526 |
Uterus
|
PAXgene |
1
|
2 pieces, myometrium; trace ~0.5mm nubbin of endometrium delineated
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace nubbin of adherent fat, delineated
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, not single artery but aggregate of smaller twigs
|
Unacceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1826 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~5-10% interstitial fat, rep delineated
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1926 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5% fascia/vascular elements
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-2026 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace dermal fat, ~1-2mm nubbins; squamous epithelium is ~50 microns
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0126 |
Aorta
|
PAXgene |
2
|
6 pieces; atherosclerotic plaques up to 0.8mm thick; adventitia up to 1.5mm thick; media appears moderately degenerated
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0226 |
Coronary artery
|
PAXgene |
1
|
2 pieces; 1 with small vessel and over 90% fat; other is all fat and myocardium
|
Unacceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; muscle and fibrous tissue about equally represented
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0426 |
Heart
|
PAXgene |
2
|
2 pieces; fragmented enlarged myofibers
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0526 |
Liver
|
PAXgene |
2
|
2 pieces; occasional portal lymphoid collections; no cirrhosis; poorly preserved and fragmented parenchyma
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0626 |
Lung
|
PAXgene |
2
|
2 pieces; moderately congested; scattered alveolar hemorrhages
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; half of the specimens have high mucosal glycogen content;
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0826 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; well dissected
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-0926 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; 1 focal lymphoid collection [1.7mm] on edge
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-1026 |
Omentum
|
PAXgene |
1
|
2 pieces; fibrous content <2%
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-1126 |
Pancreas
|
PAXgene |
3
|
2 pieces; 1 with 40% external fat; tissue dissociated
|
Unacceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-1226 |
Spleen
|
PAXgene |
2
|
2 fragmented pieces; severe congestion of red pulp
|
Acceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-1326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces of fat without any adrenal tissue
|
Unacceptable
|
 |
GTEX-1MA7X
|
61-70
|
Male
|
GTEX-1MA7X-1426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; tubules severely autolyzed; glomeruli somewhat less; scattered interstitial and glomerular scars
|
Acceptable
|
 |