GTEX-1B97J
|
41-50
|
Female
|
GTEX-1B97J-1926 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1B97J
|
41-50
|
Female
|
GTEX-1B97J-2026 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is 30-40 microns
|
Acceptable
|
|
GTEX-1B97J
|
41-50
|
Female
|
GTEX-1B97J-2126 |
Minor salivary glands
|
PAXgene |
1
|
1 piece glandular element is ~90% tissue; adherent nubbin of fat is remainder (delineated).
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0126 |
Adrenal glands
|
PAXgene |
0
|
2 pieces; cortex and medulla, trivial amount of attached fat
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; extensive lymphocytic infiltrate with germinal center formation, fibrosis, and oncocytic change c/w Hashimoto's thyroiditis
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0326 |
Omentum
|
PAXgene |
0
|
2 pieces; adipose tissue with few large vessels in 1 piece
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0426 |
Ovary
|
PAXgene |
0
|
2 pieces; few inclusion cysts
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0526 |
Vagina
|
PAXgene |
1
|
6 pieces; 5 pieces include squamous mucosa, 1 shows chronic inflammation
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0626 |
Uterus
|
PAXgene |
0
|
2 pieces; myometrium only in this section
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0726 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0826 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; target muscularis, some residual attached submucosa/vessels
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; erosive esophagitis
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1026 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa and submucosa only
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1126 |
Spleen
|
PAXgene |
1
|
2 pieces; 1 piece includes portion of capsule
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1226 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; fat (20 and 40%) and dense fibrocollagenous stroma with scattered epithelial component, focal simple hyperplasia
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; predominantly well trimmed, minimal internal fat
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 of 6 have good lymphoid component, 1 piece includes small portion of muscularis
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with two small strips of residual mucosa
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1626 |
Colon, transverse
|
PAXgene |
0
|
6 pieces; predominantly mucosa and submucosa only with small portion of muscularis in 2 pieces
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1826 |
Skin, leg
|
PAXgene |
0
|
6 pieces; includes up to 10% internal/attached fat, epidermis measures 52 microns
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1926 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue, few holes (? poor fixation)
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-2026 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; well trimmed, minimal internal fat
|
Acceptable
|
|
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-2126 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed
|
Acceptable
|
|
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-0126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 10% and 25% fibrovascular component; one sample with numerous empty spaces (arrows)
|
Acceptable
|
|