GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 9x6mm; mainly muscularis and fat, less than 3% mucosa, well preserved, delineated
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2026 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 10x6 & 10x9mm; 4x2.5mm focus of fat in one section
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2126 |
Testis
|
PAXgene |
1
|
2 pieces, 10x8 & 9x7mm; spermatogenesis is present, variably preserved (score 1--2)
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 8x4mm; squamous epithelium is ~2.5-3% thickness. Solar elastosis of papillary dermis
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 11x6 & 9.5x8mm; one with 5x3mm focus of atrophy/scar with interstitial fat, ~25% of one section
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 9x8 & 11x8mm; embedded ~0.5mm vessel, foci of fibrous tissue
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 4x3 & 5x4mm; both with rim of adherent fat up to 0.5mm, delineated
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-2626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, 5x2 & 3x3mm; both are aggregates of smaller artery branches, one with 2.5x1mm aggregate of interstitial fat and small peripheral nerve, delineated. Sample with caution
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0126 |
Skin, leg
|
PAXgene |
2
|
6 pieces, up to 11.5x4mm;
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 11x7 & 12x8mm;
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 9x8 & 8x6mm; 10% internal adipose
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 5x3 & 5x2mm; specimens are both arteries with 40% adipose
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 6x3 & 4x3mm; specimens are both nerve
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8.5x3mm;
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0726 |
Liver
|
PAXgene |
1
|
2 pieces, 9x8 & 10x8mm; 1 piece contains capsule
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0826 |
Spleen
|
PAXgene |
3
|
2 pieces, 8x6 & 9x7mm. Severe hemorrhage and congestion. A few preserved lymphoid nodules present.
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-0926 |
Omentum
|
PAXgene |
1
|
2 pieces, 9.5x8 & 10x9mm;
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1026 |
Lung
|
PAXgene |
2
|
2 pieces, 10.5x9 & 11x8mm. Extensive congestion and hemorrhage. 2 mm infarct. 3 mm bronchus, lymph node and vessels occupy 40% of 1 piece
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1126 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 7x2.5mm. Up to 1 mm thick hemorrhagic adipose tissue in adventitia.
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 12x7mm. 3 pieces are all adipose. 3 have 20-50% cortex, the remainder is adipose, blood vessels and nerves.
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1326 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 11x10 & 13x12mm; 1 piece 95% adipose; other 60% adipose
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 9x2.5mm. All have severely autolyzed mucosa; 3 have moderately autolyzed muscularis. 3 without muscularis
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces, 9.5x6 & 11x9mm; extensive autolysis
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1626 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, up to 6x5mm; well dissected mucosa
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 10x4mm; well dissected muscularis
|
Acceptable
|
|