GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 8x8 & 9x8mm; 1 piece is all adipose with 40% empty central hole. other piece has several ducts in fibrous stroma, remainder adipose
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-2526 |
Prostate
|
PAXgene |
2
|
2 pieces, 8x7 & 9x7mm; Glands=3; stroma=1. 1 piece is all fibromuscular tissue, no glands; other piece has glands as well as stroma
|
Acceptable
|
|
GTEX-XUYS
|
51-60
|
Male
|
GTEX-XUYS-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 12x5.5mm. All have large amounts of subcutaneous adipose tissue, up to 4.7 mm thick (skin is 3mm thick); 2 have attached subcutaneous veins
|
Acceptable
|
|
GTEX-XUYS
|
51-60
|
Male
|
GTEX-XUYS-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 11.5x9 & 9x8.5mm. Well fixed, no artifacts
|
Acceptable
|
|
GTEX-XUYS
|
51-60
|
Male
|
GTEX-XUYS-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 10x9.5 & 10x9mm; 10% adipose within specimen
|
Acceptable
|
|
GTEX-XUYS
|
51-60
|
Male
|
GTEX-XUYS-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, 6x5 & 6x6mm. 1 with 50% occlusive fibrocalcific plaque; 1x2mm extraneous fibroadipose tissue
|
Acceptable
|
|
GTEX-XUYS
|
51-60
|
Male
|
GTEX-XUYS-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 6x3 & 7x5mm; NO NERVE. Tendon: dense fibrous and adipose tissue
|
Unacceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 8.5x7 & 7x6mm; mild congestion; well preserved, abundant lymphoid elements
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 3x2 & 2.5x2mm; 70% occlussive atherosclerosis in both, focally calcified, delineated. Adherent nubbins of fat up to 2mm, encircled. Sample with caution
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 5.5x5mm; squamous mucosa, well-preserved, ~10-15% thickness
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 7.5x5mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 8x6mm; adherent serosa ~2mm nubbins on most sections, otherwise all muscularis; good specimens
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0626 |
Lung
|
PAXgene |
1
|
2 pieces, 7x6 & 8x7.5mm; minimal edema; good specimens
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0726 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 8.5x3mm; adherent serosa/vasa vasorum in 3 ~0.5mm thick
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0826 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 12x5mm; mucosa well preserved, ~30% total tissue
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-0926 |
Heart
|
PAXgene |
1
|
2 pieces, 10x9 & 12x10mm; minimal fibrosis
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 8x6mm; rare lymphoid aggregates, delineated
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1126 |
Liver
|
PAXgene |
1
|
2 pieces, 8x8 & 8x7mm; mild mixed micro/macrovesicular steatosis, diffuse
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1226 |
Prostate
|
PAXgene |
1
|
2 pieces, 12x10 & 11x8mm; mainly stromal hyperplasia; 20% of one section with glandular elements
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 11.5x10 & 12x8.5mm; rim of fat/small vessels up to ~1mm thick on one section
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1426 |
Omentum
|
PAXgene |
1
|
2 pieces, 14x7 & 11.5x6mm;
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 8.5x5 & 8x5mm; both ~40-50% fibrous tissue; no ductal elements seen
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1626 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, up to 8x4mm; squamous epithelium is 2-2.5% thickness
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1726 |
Pancreas
|
PAXgene |
1
|
2 pieces, 9x8 & 10x9mm; extremely well preserved, minimal fat, Islets well visualized; representative ones delineated
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x3mm; generally all muscularis, adherent fat/serosa on 3/6
|
Acceptable
|
|