GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa with early separation, up to ~0.4mm, 20-30% of thickness
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-1926 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~1mm, ~50% of thickness but with moderate-advanced autolysis, partially sloughed
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2026 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis, ~10% lymphoid aggregates, delineated
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa up to 0.4mm, ~10% of thickness, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis.
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2326 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2426 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular elements with advanced autolysis, hyperplastic pattern
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, trace dermal fat; squamous epithelium is ~35microns
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, mainly cortex, trace 3mm focus of medulla, encircled; 30% adherent fat, delineated; moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present; tubules with advance autolysis/sloughing
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2826 |
Mammary tissue (breast)
|
PAXgene |
1
|
4 pieces, mainly fibroadipose elements; one piece with stromal and ductal (rep delineated) gynecomastoid hyperplasia, piece encircled
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece, ~20% neurohypophysis (delineated, ~5mm focus); rest is adenohypophysis
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-3126 |
Brain - cerebellum
|
PAXgene |
1
|
3 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0126 |
Spleen
|
PAXgene |
1
|
2 partially fragmented pieces; up to 0.28mm artefactual outer rim possibly due to drying or incorrect fixation;
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0226 |
Omentum
|
PAXgene |
1
|
2 pieces, 1 fragmented
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0326 |
Pancreas
|
PAXgene |
1
|
2 pieces plus a separate piece of fat; larger piece has up to 3mm external fat
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0426 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; cortex with up to 3mm external adherent fat
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 1 with up to 2.3mm adherent skeletal muscle [labeled]
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0626 |
Aorta
|
PAXgene |
1
|
6 pieces; fibrous intimal plaques of variable thickness
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue without mammary ducts
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0826 |
Prostate
|
PAXgene |
1
|
2 pieces; 1 piece contains stroma and muscle without prostatic tissue [labeled]
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; 5 with submucosal mucous glands; 1 with periductal chronic inflammatory cells [labeled]
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
 |