GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2826 |
Prostate
|
PAXgene |
3
|
2 pieces, 9x9 & 8.5x8mm; glands 2 to 3; stroma= 1 (autolysis)
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 9.5x2mm; Glands = 3; muscle = 2.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x3mm; Glands = 3; muscle = 2.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2726 |
Prostate
|
PAXgene |
3
|
2 pieces, 7x6 & 8x8mm; Glands = 3; stroma = 2.
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-0326 |
Testis
|
PAXgene |
3
|
2 pieces, 7x5 & 8x7mm; spermatogeneisis present, but badly autolyzed
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-0626 |
Thyroid gland
|
PAXgene |
3
|
2 pieces, 7x6 & 7x6mm; unusually badly autolyzed, diffuse Hashimoto thyroiditis with regressive changes
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-0726 |
Lung
|
PAXgene |
3
|
2 pieces, 9x7 & 9x8mm; badly autolyzed
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-1226 |
Muscle, skeletal
|
PAXgene |
3
|
2 pieces, 8x7.5 & 9x5mm; <5% interstitial fat (focal, delineated), unusually badly autolyzed
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-1326 |
Liver
|
PAXgene |
3
|
2 pieces, 9x8 & 8x7mm; ~20% macrovesciular steatosis
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-1426 |
Spleen
|
PAXgene |
3
|
2 pieces, 8.5x7 & 10x8mm; badly autolyzed, congested
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-1826 |
Pancreas
|
PAXgene |
3
|
2 pieces, 8x8 & 9x7mm; ~50% parenchyma, badly autolyzed/saponified, delineated; rest is intermingled fat
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-1926 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, up to 8x3mm;
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-2026 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, 8x8 & 9x7mm; ~20% fat delineated, rest is cortex, badly autolyzed
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-2126 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 10x5mm; mucosa completely autolyzed/sloughed
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 5x2mm; ~10% lymphoid aggregates delineated, badly autolyzed
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 8x3mm; ~10% thickness is mucosa but badly autolyzed
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-2726 |
Prostate
|
PAXgene |
3
|
2 pieces, up to 9x9mm; one with badly autolyzed glands (delineated), the other is all stroma
|
Acceptable
|
|
GTEX-X8HC
|
51-60
|
Female
|
GTEX-X8HC-2226 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 8x3mm; Mucosa=3; muscle = 2. Mucosal hemorrhage.
|
Acceptable
|
|
GTEX-X8HC
|
51-60
|
Female
|
GTEX-X8HC-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 8.5x3mm; Mucosa=3; muscle = 2. Mucosal hemorrhagic infarcts (bowel infarcts by clinical history).
|
Acceptable
|
|
GTEX-XBEC
|
51-60
|
Male
|
GTEX-XBEC-1926 |
Spleen
|
PAXgene |
3
|
2 pieces 8x8 & 10x7mm; marked congestion, poorly preserved
|
Acceptable
|
|
GTEX-XBEC
|
51-60
|
Male
|
GTEX-XBEC-2126 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, 10x4 & 9x4mm; ~40-50% fat, delineated, rest is all cortex
|
Acceptable
|
|
GTEX-XBEC
|
51-60
|
Male
|
GTEX-XBEC-2226 |
Pancreas
|
PAXgene |
3
|
2 pieces, 9.5x7 & 9x8mm; minimal adherent fat, delineated, poorly preserved
|
Acceptable
|
|
GTEX-XBEC
|
51-60
|
Male
|
GTEX-XBEC-2326 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, up to 8x3mm;
|
Acceptable
|
|
GTEX-XBEC
|
51-60
|
Male
|
GTEX-XBEC-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 9x2mm; mucosa sloughed
|
Acceptable
|
|
GTEX-XBEC
|
51-60
|
Male
|
GTEX-XBEC-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 5x2mm; ~10-20% lymphoid elements, delineated (rep), poorly preserved
|
Acceptable
|
|