GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, surface mucosa moderately autolyzed, up to ~0.3mm
|
Acceptable
|
 |
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2226 |
Prostate
|
PAXgene |
1
|
2 pieces, hyperplastic glandular pattern
|
Acceptable
|
 |
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2326 |
Ileum
|
PAXgene |
1
|
4 pieces, ~5-10% target lymphoid aggregates, rep delineated
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; 1 piece includes portion of capsule (target region is 5mm below capsule)
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; some carryover noted
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0326 |
Heart
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0426 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 50-60% is fat/fibrous/blood
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0626 |
Lung
|
PAXgene |
1
|
2 pieces; numerous macrophages, areas of collapse, fibrosis, and dilated spaces, some carryover (circled)
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0726 |
Liver
|
PAXgene |
1
|
2 pieces; 1 piece includes portion of capsule (target region is 1cm below), steatosis
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; patchy eosinophilic squamous surface, chronic inflammation, and hyperplasia c/w reflux, fragment of mucosa of GE junction
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; predominantly muscularis, some residual submucosa/fat
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1126 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa and submucosa, superficial sloughing/autolysis
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; mature fat
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1326 |
Pancreas
|
PAXgene |
1
|
2 pieces; trivial attached fat, some fibrosis /atrophy
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair-bearing skin with from ~5-15% internal and attached fat
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mature fat with some central defects, <10% fibrous component
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1926 |
Artery - tibial
|
PAXgene |
1
|
3 pieces; 2 pieces are artery with focal intimal thickening, 3rd piece is fat/fibrous/nerve
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2026 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; nerve with partial rim of fat comprising 25-40% of the specimen
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with small portion of tendon, fat
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; includes up to ~20% attached fat, epidermis measures 33 microns
|
Acceptable
|
 |
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; mature fat with scant fibrous component, focal fat necrosis
|
Acceptable
|
 |
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0126 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; atheromatous plaque with mural organizing thrombosis narrowing the lumen by ~50% and 75% (arrows); ~1mm of attached adventitia
|
Acceptable
|
 |
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0226 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; trace rim of adherent fat
|
Acceptable
|
 |