GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1426 |
Ovary
|
PAXgene |
1
|
2 pieces; atrophic, corpora albicans, several small cysts
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1526 |
Uterus
|
PAXgene |
1
|
2 pieces; small focus of endometrium present (annotated)
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1626 |
Esophagus - mucosa
|
PAXgene |
2
|
4 pieces; partly sloughed epithelium; small samples
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed muscle
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; only 2 of 6 are muscularis, 4 are mucosa and submucosa; only useful for TMA or laser capture [annotated]
|
Unacceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1926 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa too autolyzed for GTEx; muscularis variable in amount, might be useful for TMA or laser capture
|
Unacceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2026 |
Ileum
|
PAXgene |
2
|
5 pieces; abundant lymphoid tissue [delineated]; mucosa autolyzed but lymphoid tissue still appears intact
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa=3; muscularis=1; only muscle useful for GTEx
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; small amounts of totally autolyzed mucosa delineated; muscle slightly autolyzed
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2426 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; largely fatty tissue with ductal-lobular units essentially confined to 1 piece
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2526 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, but fragmented
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; 10% internal fat
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2926 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed of fat; some perivascular stroma present [annotated]
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-3026 |
Brain - cerebellum
|
PAXgene |
1
|
3 pieces
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-3126 |
Brain - cortex
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-3226 |
Pituitary gland
|
PAXgene |
1
|
1 piece with anterior and posterior portions
|
Acceptable
|
 |
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces: sample blindly with care: one aliquot is ~20% cortex (delineated), rest fat; other is 90% cortex, well preserved
|
Acceptable
|
 |
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis
|
Acceptable
|
 |
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0426 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces, mainly fat/myocardium, minute vessel, not sufficient for GTEx use
|
Unacceptable
|
 |
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0626 |
Heart
|
PAXgene |
1
|
2 pieces, minimal ischemic damage
|
Acceptable
|
 |