GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 9x3mm; Mucosa badly autolyzed, ~25% of thickness
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-1026 |
Lung
|
PAXgene |
3
|
2 pieces, 6x6 & 6x3mm;
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-1126 |
Kidney - cortex
|
PAXgene |
3
|
4 pieces, up to 4x2mm;
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces, 7x6 & 7x7mm;
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-1626 |
Spleen
|
PAXgene |
3
|
2 pieces, 7x7 & 7x5mm; congested; large vessels at center of one piece (~40%)
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 6x1mm; mucosa=3; muscle=2
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-2026 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 5.5x3mm; mucosa=3;lymphoid=2;muscle=2; 2 have mucosal lymphoid tissue; all have full wall thickness;
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-2126 |
Colon, sigmoid
|
PAXgene |
3
|
4 pieces, up to 6x2mm; mucosa=3;muscle=2; 2 with mucosa + muscle; 2 with muscle
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-2226 |
Prostate
|
PAXgene |
3
|
2 pieces, 7x6 & 7x7mm; glands autolyzed
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-2526 |
Esophagus - mucosa
|
PAXgene |
3
|
4 pieces, up to 4x3mm; mucosa unusually autolyzed; thick muscularis mucosae; chronic inflammation
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-1426 |
Spleen
|
PAXgene |
3
|
2 pieces, 8x7.5 & 9x7mm; autolysis varies from 2 to 3
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 9x5mm; mucosa=3; muscularis =2
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2626 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 5x2mm; mucosa and lymphoid tissue autolyzed; well trimmed from muscularis
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2826 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 7x1mm; totally autolyzed mucosa; muscle also autolyzed; of limited molecular value
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1126 |
Spleen
|
PAXgene |
3
|
2 pieces, 10x7 & 8x7mm;
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1226 |
Pancreas
|
PAXgene |
3
|
2 pieces, 11x8 & 10x6.5mm; badly saponified/autolyzed, Islets not well visualized
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1826 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, 9x6 & 8x6.5mm; all cortex, focal fat ~10% of specimens, delineated, badly autolyzed
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-2226 |
Vagina
|
PAXgene |
3
|
6 pieces, up to 8x4mm; squamous mucosa sloughing, <1% thickness
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 8x3mm; mucosa delineated (rep), badly autolyzed
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-2826 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 5x2mm; mainly autolyzed mucosa, 5-10% lymphoid elements delineated (rep)
|
Acceptable
|
|
GTEX-X4XX
|
61-70
|
Male
|
GTEX-X4XX-2426 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 9x3mm; Well sampled mucosa (3) and muscle (2).
|
Acceptable
|
|
GTEX-X4XX
|
61-70
|
Male
|
GTEX-X4XX-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 8x2mm; Well sampled mucosa (3) and muscle (2).
|
Acceptable
|
|
GTEX-X4XX
|
61-70
|
Male
|
GTEX-X4XX-2726 |
Prostate
|
PAXgene |
3
|
2 pieces, 7.5x7 & 8x8mm; Glands=3; fibromuscular stroma=1 (autolysis)
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 7x3mm; mostly mucosa/submucosa (targets) but extensively autolyzed; small lymphoid foci
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x3mm; mucosa mostly 3, some foci are 2; muscularis=2 (autolysis)
|
Acceptable
|
|