GTEX-13OW7
|
51-60
|
Male
|
GTEX-13OW7-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, advanced autolysis; ~20% total are lymphoid aggregates reasonably well preserved, best for TMA/LCM studies
|
Acceptable
|
|
GTEX-13OW8
|
61-70
|
Male
|
GTEX-13OW8-3126 |
Ileum
|
PAXgene |
2
|
6 pieces; severely autolyzed mucosa, but residual lymphoid component, muscularis also present (not target)
|
Unacceptable
|
|
GTEX-13PDP
|
61-70
|
Male
|
GTEX-13PDP-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; fragments of autolyzed mucosa and muscularis (not target) with no significant residual lymphoid tissue (target)
|
Unacceptable
|
|
GTEX-13PL6
|
41-50
|
Female
|
GTEX-13PL6-1926 |
Ileum
|
PAXgene |
3
|
4 pieces, glandular elements completely autolyzed; residual lymphoid aggregates are ~10-20% of tissue, optimal for TMA/LCM
|
Acceptable
|
|
GTEX-13PL7
|
61-70
|
Female
|
GTEX-13PL7-2626 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, lymphoid aggregates ~10-15% total
|
Acceptable
|
|
GTEX-13PVQ
|
51-60
|
Male
|
GTEX-13PVQ-2826 |
Ileum
|
PAXgene |
2
|
4 pieces; several lymphoid collections [outlined] suitable for LCM, but too diluted by autolyzed non-lymphoid tissue for GTEx
|
Unacceptable
|
|
GTEX-13PVR
|
61-70
|
Female
|
GTEX-13PVR-1526 |
Ileum
|
PAXgene |
1
|
6 pieces, well-preserved, lymphoid aggregares are ~20% total, good specimen
|
Acceptable
|
|
GTEX-13QBU
|
21-40
|
Female
|
GTEX-13QBU-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, abundant lymphoidd aggregates up to ~50% total tissue, rep. delineated
|
Acceptable
|
|
GTEX-13QIC
|
61-70
|
Female
|
GTEX-13QIC-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with residual lymphoid nodules (some outlined)
|
Unacceptable
|
|
GTEX-13QJ3
|
51-60
|
Male
|
GTEX-13QJ3-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, 10-20% lymphoid aggregates remain in sloughed mucosa
|
Acceptable
|
|
GTEX-13QJC
|
61-70
|
Female
|
GTEX-13QJC-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; limited number of lymphoid nodules (outlined) diluted by extraneous tissue; better suited for LCM
|
Unacceptable
|
|
GTEX-13RTJ
|
51-60
|
Male
|
GTEX-13RTJ-1826 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosa completely autolyzed/sloughed; residcual lymphoid aggegates 10-15% tissue, rep. delineated
|
Acceptable
|
|
GTEX-13RTK
|
21-40
|
Male
|
GTEX-13RTK-0826 |
Ileum
|
PAXgene |
2
|
6 pieces, ~10% lymphoid aggregates, rep delineated
|
Acceptable
|
|
GTEX-13S7M
|
61-70
|
Female
|
GTEX-13S7M-1326 |
Ileum
|
PAXgene |
2
|
4 pieces; too little lymphoid tissue; barely useful for LCM
|
Unacceptable
|
|
GTEX-13S86
|
41-50
|
Male
|
GTEX-13S86-1726 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid tissue in 3 pieces (outlined)
|
Acceptable
|
|
GTEX-13SLW
|
61-70
|
Male
|
GTEX-13SLW-2626 |
Ileum
|
PAXgene |
3
|
6 pieces, totally autolyzed, less than 5% lympohid elements
|
Acceptable
|
|
GTEX-13SLX
|
51-60
|
Female
|
GTEX-13SLX-2626 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, 3 of 6 pieces have abundant lymphoid tissue
|
Acceptable
|
|
GTEX-13U4I
|
41-50
|
Female
|
GTEX-13U4I-2326 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosa autolyzed/sloughed. Lymphoid cells diffuse through lamina propria; foci delineated
|
Acceptable
|
|
GTEX-13VXT
|
21-40
|
Female
|
GTEX-13VXT-2226 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue on 3 pieces; muscularis present on all
|
Acceptable
|
|
GTEX-13VXU
|
51-60
|
Male
|
GTEX-13VXU-1726 |
Ileum
|
PAXgene |
3
|
6 pieces; small amount of partly autolyzed lymphoid tissue. LCM
|
Unacceptable
|
|
GTEX-13W3W
|
61-70
|
Female
|
GTEX-13W3W-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved; lymphoid aggreates/Peter patches are ~20% total
|
Acceptable
|
|
GTEX-13W46
|
51-60
|
Male
|
GTEX-13W46-2526 |
Ileum
|
PAXgene |
2
|
4 pieces (fragmented); autolyzed with minimal lymphoid tissue
|
Unacceptable
|
|
GTEX-13X6H
|
51-60
|
Female
|
GTEX-13X6H-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; lymphoid tissue in several pieces [circled]; muscularis propria included in 5
|
Acceptable
|
|
GTEX-13X6I
|
61-70
|
Male
|
GTEX-13X6I-2526 |
Ileum
|
PAXgene |
2
|
5 pieces; fragments of muscularis and autolyzed mucosa, scattered residual lymphoid tissue present
|
Unacceptable
|
|
GTEX-13X6J
|
51-60
|
Male
|
GTEX-13X6J-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; good lymphoid component, but very autolyzed, muscularis (not target) also present
|
Unacceptable
|
|