GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-2126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; no adrenal; only fat
|
Unacceptable
|
|
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; limited amount of lymphoid tissue [annotated]; better suited for LCM
|
Unacceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, no squamous epithelium seen, pseudodiverticulosis
|
Unacceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1526 |
Pancreas
|
PAXgene |
2
|
2 pieces; 1 piece has only 3 x 1.3mm pancreas, remainder fat; other piece is all fat; may be better for LCM [annotated]
|
Unacceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; 5 and half of 6th are medulla; small cortex sample [annotated]
|
Unacceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1926 |
Ileum
|
PAXgene |
2
|
6 pieces; 2 small lymphoid nodules [annotated] in autolyzed mucosa; muscularis (not target) in all; may be useful for LCM
|
Unacceptable
|
|
GTEX-139TU
|
61-70
|
Male
|
GTEX-139TU-2326 |
Ileum
|
PAXgene |
3
|
5 pieces; fragments of muscularis (not target) and autolyzed mucosa with no significant lymphoid tissue
|
Unacceptable
|
|
GTEX-139UC
|
61-70
|
Male
|
GTEX-139UC-1726 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces all squamous mucoa/stroma, no glandular tissue
|
Unacceptable
|
|
GTEX-13CIG
|
51-60
|
Male
|
GTEX-13CIG-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces; extensive autolysis
|
Unacceptable
|
|
GTEX-13CIG
|
51-60
|
Male
|
GTEX-13CIG-1926 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; epithelium largely sloughed; muscularis propria [not target] sampled on 2 of 6 [annotated]
|
Unacceptable
|
|
GTEX-13CIG
|
51-60
|
Male
|
GTEX-13CIG-2126 |
Stomach
|
PAXgene |
3
|
6 pieces; totally autolyzed
|
Unacceptable
|
|
GTEX-13CZV
|
61-70
|
Male
|
GTEX-13CZV-0626 |
Lung
|
PAXgene |
2
|
2 pieces; bronchiectasis, bronchitis, extensive fibrosis; no normal lung parenchyma
|
Unacceptable
|
|
GTEX-13CZV
|
61-70
|
Male
|
GTEX-13CZV-2026 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; too autolyzed, surface sloughed
|
Unacceptable
|
|
GTEX-13CZV
|
61-70
|
Male
|
GTEX-13CZV-2426 |
Stomach
|
PAXgene |
3
|
6 pieces; too autolyzed
|
Unacceptable
|
|
GTEX-13FHO
|
61-70
|
Male
|
GTEX-13FHO-2526 |
Ileum
|
PAXgene |
3
|
4 pieces; predominantly autolyzed mucosa with some residual lymphoid tissue and muscularis (not target)
|
Unacceptable
|
|
GTEX-13FHO
|
61-70
|
Male
|
GTEX-13FHO-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, full thickness colon
|
Unacceptable
|
|
GTEX-13FHP
|
51-60
|
Male
|
GTEX-13FHP-2226 |
Ileum
|
PAXgene |
2
|
4 pieces; mostly muscle, no lymphoid tissue
|
Unacceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1026 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; one piece is nearly entierly fibrous, second is 70% fibrous and fatty
|
Unacceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1826 |
Ileum
|
PAXgene |
3
|
5 pieces; predominantly moderately and severely autolyzed mucosa with only minimal lymphoid tissue and few foci of muscularis (not target)
|
Unacceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; 5 are full thickness, one lacks mucosa, mucosa is severely autolyzed
|
Unacceptable
|
|
GTEX-13FLW
|
51-60
|
Male
|
GTEX-13FLW-0826 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed pancreas
|
Unacceptable
|
|
GTEX-13FLW
|
51-60
|
Male
|
GTEX-13FLW-2926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa, residual muscularis
|
Unacceptable
|
|
GTEX-13FLW
|
51-60
|
Male
|
GTEX-13FLW-3026 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with scant lymphoid component, muscularis (not target), contaminating fragment of skeletal muscle
|
Unacceptable
|
|
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-0426 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; 5 of 6 include muscularis, but ~50% of each is residual fat, vessels and significant component of nerve, one piece is entirely fat/incidental lymph node/vessels
|
Unacceptable
|
|
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-0826 |
Gastroesophageal junction
|
PAXgene |
0
|
4 pieces; mucosa, not muscularis (target)
|
Unacceptable
|
|