GTEX-13N2G
|
51-60
|
Male
|
GTEX-13N2G-2826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; adipose tissue and ductal structures embedded in fibrotic stroma
|
Acceptable
|
 |
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-1426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; ductal structures embedded in dense fibrous stroma; minimal fat
|
Acceptable
|
 |
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; atherosclerotic plaque 40% and 10%; blood clot in lumen; well trimmed
|
Acceptable
|
 |
GTEX-13NZ8
|
61-70
|
Female
|
GTEX-13NZ8-2426 |
Ileum
|
PAXgene |
1
|
5 pieces; 8 small lymphoid nodules in autolyzed mucosa; may be more suited for LCM
|
Acceptable
|
 |
GTEX-13NZ8
|
61-70
|
Female
|
GTEX-13NZ8-2626 |
Uterus
|
PAXgene |
1
|
2 pieces; myometrium in these cuts
|
Acceptable
|
 |
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2126 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, glomeruli present in all sections, some areas approach score 2 for autolysis, better preserved than typical
|
Acceptable
|
 |
GTEX-13NZB
|
21-40
|
Male
|
GTEX-13NZB-1426 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; glomeruli in all sections, congestion, 1 piece has ~15% attached fat
|
Acceptable
|
 |
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2026 |
Pancreas
|
PAXgene |
2
|
2 pieces; 80 & 50% fat; partial (20%) atrophy in 1. May be used for LCM.
|
Unacceptable
|
 |
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2926 |
Uterus
|
PAXgene |
2
|
2 pieces; 1 has 40% endometrium with cystic atrophy and adenomyosis; other is all myometrium (in this cut)
|
Acceptable
|
 |
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-0926 |
Omentum
|
PAXgene |
0
|
2 pieces; foci of lymphoid cells; large blood vessel in 1 piece (10%)
|
Acceptable
|
 |
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-1126 |
Aorta
|
PAXgene |
1
|
6 pieces; linear plaques; tributary in 2 pieces
|
Acceptable
|
 |
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-2126 |
Pancreas
|
PAXgene |
1
|
2 pieces; no alteration in islet cell content
|
Acceptable
|
 |
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-2226 |
Ileum
|
PAXgene |
2
|
5 pieces; lymphoid tissue is generally diffusely distributed in mucosa
|
Acceptable
|
 |
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-0626 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; 1 has 20% internal & external fibrofatty tissue [in part outlined]
|
Acceptable
|
 |
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-1126 |
Omentum
|
PAXgene |
0
|
2 pieces; no increase in fibrous stroma
|
Acceptable
|
 |
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-1226 |
Pancreas
|
PAXgene |
2
|
2 pieces; 10% internal fat; islets appear reduced in number
|
Acceptable
|
 |
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-1426 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 40% external fat in 1 piece
|
Acceptable
|
 |
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; lymphoid tissue [outlined] in each piece, but muscularis propria also present
|
Acceptable
|
 |
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue, no ducts; large hole in 1 piece
|
Acceptable
|
 |
GTEX-13O61
|
61-70
|
Male
|
GTEX-13O61-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
4 pieces; squamous hyperplasia and chronic inflammation especially in subepithelial glands (elevated lymphoid content) in 2 of 4 pieces [outlined]
|
Acceptable
|
 |
GTEX-13O61
|
61-70
|
Male
|
GTEX-13O61-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
4 pieces; submucosal gland in 2 pieces [outlined]
|
Acceptable
|
 |
GTEX-13OVG
|
61-70
|
Male
|
GTEX-13OVG-0726 |
Coronary artery
|
PAXgene |
1
|
2 pieces, hemisections, adherent nubbins of fat up to ~2mm; ~50% occlusive atherosis noted in one section (est)
|
Acceptable
|
 |
GTEX-13OVG
|
61-70
|
Male
|
GTEX-13OVG-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
7 pieces, all muscularis, adherent nubbin serosa in one section, delineated
|
Acceptable
|
 |
GTEX-13OVG
|
61-70
|
Male
|
GTEX-13OVG-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa ~0.4mm, ~20% thickness, not well preserved, missing in some sections
|
Acceptable
|
 |
GTEX-13OVG
|
61-70
|
Male
|
GTEX-13OVG-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~90% muscularis, 'contaminant' mucosa in all sections
|
Acceptable
|
 |