GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~6x2mm, squamous mucosa is ~10-15% thickness
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~10x3mm, all muscularis, good specimens
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces ~8x3mm, all muscularis, good specimens
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-1926 |
Liver
|
PAXgene |
1
|
2 pieces ~7x7mm, 30% macrovesicular steatosis, moderate passive congestion
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2026 |
Spleen
|
PAXgene |
2
|
2 pieces ~8x5mm
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2126 |
Pancreas
|
PAXgene |
1
|
2 pieces ~8x7mm well preserved, Islets well visualized, representative ones encircled, 30% of one aliquot is parenchyma, 90% of the other, both delineated
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2226 |
Omentum
|
PAXgene |
1
|
2 pieces ~9x8mm
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2326 |
Stomach
|
PAXgene |
2
|
6 pieces ~8x3mm 10-15% mucosa, moderate-severely autolyzed, diffuse chronic gastritis, pattern suggests H pylori
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2426 |
Ileum
|
PAXgene |
1
|
4 pieces ~20% lymphoid elements delineated, rest mainly mucosa ~4x2mm
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~7x4mm, mucosa moderately autoyzed, 10-20% of thickness
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~7x2mm, ~90% muscularis, representative area delineated
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2726 |
Prostate
|
PAXgene |
2
|
2 pieces ~9x8mm. Moderate-severe glandular autolysis, diffuse acute and chronic prostatitis, areas delineated
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 8x3mm; 3 have up to 1 mm subcutaneous adipose
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 9x7 & 9x7mm; 1 with 50% fibrous tissue (tendon)
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 6x4 & 7x3mm; 20% peripheral adipose
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0426 |
Artery - tibial
|
PAXgene |
2
|
2 pieces, 3x2 & 3x3mm; severe medial calcification; a small 0.7mm artery (and vein) nearby are free of lesions
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8.5x3mm; all have up to 1.5 mm subcutaneous adipose
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0626 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces, 8x8 & 8.5x8mm; moderate atrophy; 20% internal adipose
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 9x7.5 & 9x9mm; extensive fibrosis and lymphoid infiltrate typical of advanced Hashimoto thyoiditis (correlates with patient's hypothyroidism); oxyphilic metaplasia circled
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0826 |
Lung
|
PAXgene |
2
|
2 pieces, 8x7 & 7x6mm; moderate vascular and interstitial fibrosis; heart failure cells
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0926 |
Atrial appendage
|
PAXgene |
2
|
2 pieces, 9x6.5 & 8x7mm; no fat
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 9x8 & 8x8mm; all adipose, no mammary tissue; a few small defects
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1126 |
Coronary artery
|
PAXgene |
2
|
2 pieces, 3.5x3 & 3x2mm; severe atheromatous and calcific changes; no normal tissue
|
Unacceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1226 |
Heart
|
PAXgene |
1
|
2 pieces, 10x7 & 8x7mm; mild patchy fibrosis
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1326 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 8x2mm; fine medial calcification, no plaques
|
Acceptable
|
|