|
GTEX-1F48J
|
51-60
|
Female
|
GTEX-1F48J-0626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; atrophic ducts and lobules in 1, all adipose in other
|
Acceptable
|
 |
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; <5% fibrous content
|
Acceptable
|
 |
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-1026 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; mostly fat with minute atrophic ducts
|
Acceptable
|
 |
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-2126 |
Pancreas
|
PAXgene |
3
|
2 pieces; a few foci of moderate autolysis, but overall severe; cannot distinguish islets from exocrine tissue
|
Acceptable
|
 |
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-2526 |
Ileum
|
PAXgene |
3
|
4 pieces; severely autolyzed mucosa with moderately autolyzed lymphoid tissue that comprises <30% of sample; LCM
|
Unacceptable
|
 |
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; up to 40% submucosal fibroadipose tissue
|
Acceptable
|
 |
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-0226 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; minimal fibrofatty tissue
|
Acceptable
|
 |
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-0926 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; severe arterial, arteriolar, & glomerular sclerosis with extensive tubular hyalin casts; no normal tissue remains
|
Unacceptable
|
 |
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; all have muscularis and fat, no mucosa or lymphoid tissue
|
Unacceptable
|
 |
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2126 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; dense fibrous stroma and ductal proliferation consistent with gynecomastia, especially in 1 piece
|
Acceptable
|
 |
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 10% vascular content
|
Acceptable
|
 |
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; severely sclerotic, calcified, ossified plaques; 1 with 60% extraneous fibrofatty tissue
|
Acceptable
|
 |
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~40% fascia/vacular elements
|
Acceptable
|
 |
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibrous mastopathy; ductal/lobular elements atrophic, rep. delineated
|
Acceptable
|
 |
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, colonic mucosa, unknown site, not GTEx target tissue
|
Unacceptable
|
 |
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; one has large central defect (?fixation)
|
Acceptable
|
 |
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2126 |
Omentum
|
PAXgene |
1
|
2 pieces; mature adipose tissue, detached portion of fibrous tissue
|
Acceptable
|
 |
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mature adipose tissue with 30 and 50% dense fibrocollagenous stroma with scattered ducts
|
Acceptable
|
 |
|
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 70% fibrous tissue, insufficient adipose for target GTEx tissue
|
Unacceptable
|
 |
|
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1026 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular elments autolyzed; residucal viable lymphoid aggregates are ~30% tissue
|
Acceptable
|
 |
|
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements only
|
Acceptable
|
 |
|
GTEX-1F6RS
|
61-70
|
Female
|
GTEX-1F6RS-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; <5% fibrous content
|
Acceptable
|
 |
|
GTEX-1F6RS
|
61-70
|
Female
|
GTEX-1F6RS-0626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; atrophic >90% fat; scattered small ducts
|
Acceptable
|
 |
|
GTEX-1F6RS
|
61-70
|
Female
|
GTEX-1F6RS-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; insufficient lymphoid tissue; mucosa autolyzed
|
Unacceptable
|
 |
|
GTEX-1F75A
|
51-60
|
Male
|
GTEX-1F75A-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5-10% fascia, rep delineated
|
Acceptable
|
 |