GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with small component of fat/tendon
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; <10% attached fat
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; well trimmed
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0726 |
Thyroid gland
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0826 |
Omentum
|
PAXgene |
0
|
2 pieces; lobulated fat
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 20-30% fat, remainder is dense stroma with focus of ductal epithelium with apocrine and cystic change
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1026 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; mucosa, not muscularis
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1126 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; submucosa
|
Unacceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; predominantly submucosa
|
Unacceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1426 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1526 |
Lung
|
PAXgene |
1
|
2 pieces; some collapse, bronchopneumonia
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1626 |
Prostate
|
PAXgene |
1
|
2 pieces; one piece has good admixture of stroma and glands, second is predominantly stroma
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; muscularis (target is full thickness) - can be compared to sigmoid colon specimen
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1826 |
Skin, suprapubic
|
PAXgene |
0
|
5 pieces; well trimmed, scant internal fat
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis with trace residual mucosa and attached fat
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; full thickness sections with residual attached fat, several good lymphoid follicles in 2 of 6 pieces
|
Unacceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements, trace ducts, rep delineated
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0426 |
Lung
|
PAXgene |
1
|
2 pieces, patchy mild edema
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0526 |
Liver
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0626 |
Aorta
|
PAXgene |
1
|
6 pieces, trace atherosis
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces, well preserved, Islets abundant and well-visualized; rep delineated
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0826 |
Omentum
|
PAXgene |
1
|
2 pieces, vascular elements are ~5-10% of tissue
|
Acceptable
|
 |