GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1426 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 8x3mm; all with extensive atheromatous, calcified, hemorrhagic plaques; little uninvolved tissue remains
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1526 |
Liver
|
PAXgene |
1
|
2 pieces, 9x6.5 & 10x8mm; cardiac cirrhosis:central atrophy and fibrosis with early bridging; large vessels on 2 edges of 1 piece (~20% of piece)
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1626 |
Spleen
|
PAXgene |
1
|
2 pieces, 7x7 & 8x5mm; moderate congestion
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces, 8x8 & 8x7mm; ~20% peripheral adipose in 1 piece; islets not sclerosed or reduced in number
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7x3mm; cortex with crystals in tubules; little sclerosis
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 14x3 & 13x4mm; cortex and medulla well represented; no extraneous adipose tissue
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2026 |
Omentum
|
PAXgene |
1
|
2 pieces, 8.5x8 & 7x4mm; well fixed, no artifacts
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2126 |
Prostate
|
PAXgene |
2
|
2 pieces, 10x9 & 8x8mm; mostly fibromuscular
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2226 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 7x3mm; mucosa=3; muscle =2 (autolysis)
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2326 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 9x4mm;
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2426 |
Esophagus - mucosa
|
PAXgene |
1
|
5 pieces, up to 6x2mm; glands not well preserved
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2526 |
Ileum
|
PAXgene |
2
|
5 pieces, up to 6x2mm; 2 lymphoid nodules; autolyzed mucosa; all have (UNWANTED muscularis)
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x1.5mm; mucosa = 3, muscle =2 (autolysis).
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x3.5mm; only 1 is free of mucosa, 5 have UNWANTED mucosa; musc=2, mucosa=3 (autolysis)
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2826 |
Skin, suprapubic
|
PAXgene |
2
|
6 pieces, up to 8x3mm; 3 have up to 1.5mm subcutaneous adipose tissue
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0126 |
Lung
|
PAXgene |
1
|
2 pieces ~7x6, one with marked congestion/chronic pneumonitis
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0226 |
Aorta
|
PAXgene |
1
|
6 pieces ~9x1mm, 4 of 6 have adherent fat/vasa vasorum up to 2mm thick, delineated
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0326 |
Prostate
|
PAXgene |
1
|
2 pieces ~11x4mm, one with adherent fat/fibrous nubbin up to 5mm
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces ~4x3mm 10-15% squamous mucosa, numerous submucosal glands present, representative ones encircled
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~6x5mm, all muscularis, should be labeled as such
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~5x2mm, squamous mucosa is ~20% of thickness. should be labeled mucosa
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0726 |
Omentum
|
PAXgene |
1
|
1 piece ~12x8mm
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces ~10x5mm. Squamous epithelium is 2-3% of thickness
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-0926 |
Stomach
|
PAXgene |
1
|
6 pieces ~9x5mm. Mucosa remarkably well-preserved ~25% of thickness
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
1 piece ~11x11mm. Single minute focus of ductal elements, encircled
|
Acceptable
|
|