GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1426 |
Ileum
|
PAXgene |
1
|
3 pieces, excellent specimen; well preserved with Peyer patches ~50% of specimen, rep areas delineated
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1526 |
Colon, transverse
|
PAXgene |
1
|
3 pieces; mucosa beautifully preserved, ~10-15% thickness, excellent specimen
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1626 |
Stomach
|
PAXgene |
1
|
3 pieces, excellent specimen, well preserved mucosa is ~50% thickness, ave 1mm
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1726 |
Colon, sigmoid
|
PAXgene |
1
|
3 pieces, all muscularis, good specimens
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
1 piece, trace ductal elements (rep. delineated) glandular and stromal gynecomastoid hyperplasia
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1926 |
Prostate
|
PAXgene |
1
|
1 piece. Diffuse high grade adenocarcinoma (Gleason sum score 5+4=9). Cannot be used for GTEx
|
Unacceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-2026 |
Testis
|
PAXgene |
1
|
1 piece, spermatogenesis is present. Unusally prominent Leydig cell aggregates; rep ones delineated.
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, well trimmed, squamous epithelium is 30-65 microns thick
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, focal vascular calicification
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, both with partial rim of adipose tissue (~20-40% total)
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, one piece is rim of vessel with fragments of calcified material, second is incomplete section due to severe calcific sclerosis with narrowing of the lumen
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-0926 |
Heart
|
PAXgene |
1
|
2 pieces, evidence of remote (fibrosis) and acute myocardial infarction (coagulative necrosis, edema, neutorphilic infiltrate)
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces, peripheral rim of fat measuring up to 1.4mm in thickness, calcific atherosclerosis, one piece not intact with rim of vessel with fragments of calcified material
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1126 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, interstitial fibrosis and large patch of fibrous tissue
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1226 |
Lung
|
PAXgene |
1
|
2 pieces, hemosiderin-laden macrophages, congestion
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1326 |
Aorta
|
PAXgene |
1
|
6 pieces, mild atherosclerosis
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
4 pieces, mucosa partly sloughed
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, few submucosal glands (delineated)
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, some with attached adipose tissue
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-1726 |
Omentum
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-2726 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous epithelium is largely sloughed in several pieces, arteriosclerosis with calcification and narrowing of the lumen
|
Acceptable
|
|
GTEX-ZVE2
|
51-60
|
Male
|
GTEX-ZVE2-0126 |
Testis
|
PAXgene |
1
|
2 pieces, decreased spermatogenesis and peritubular fibrosis
|
Acceptable
|
|
GTEX-ZVE2
|
51-60
|
Male
|
GTEX-ZVE2-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces, well trimmed
|
Acceptable
|
|
GTEX-ZVE2
|
51-60
|
Male
|
GTEX-ZVE2-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, septal fibrosis 20%
|
Acceptable
|
|
GTEX-ZVE2
|
51-60
|
Male
|
GTEX-ZVE2-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, larger piece has ~10% adipose tissue
|
Acceptable
|
|