GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-0726 |
Lung
|
PAXgene |
2
|
2 pieces, marked DAD-type process with fibrin/chronic pneunonitits
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-0826 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-0926 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present, badly autolyzed
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1026 |
Pancreas
|
PAXgene |
3
|
1 piece, severely autolyzed/saponified.
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1126 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular portion of mucosa completely autolyzed; residucal lympoid aggregates are ~25% total tissue
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1226 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, all muscularis, unusually autolyzed
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1326 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, squamous mucosa unusually significantly autolyzed, residucal foci are ~0.1mm, largely sloughed
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all muscularis
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1526 |
Omentum
|
PAXgene |
1
|
2 pieces, minimal-no vascular tissue/fibrosis
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, mainly cortex, ~3mm focus of medulla, moderately/markedly autolyzed
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1726 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular component badly autolyzed
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, ~10% 'contaminant' totally autolyzed mucosa
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.2mm thick, badly autolyzed/sloughed
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose tissue, no ductal elements
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2126 |
Testis
|
PAXgene |
2
|
1 piece, moderate/severe autolysis. spermatogenesis appears present but reduced
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2226 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, squamous epithelium is ~40 microns; subcutaneous adherent fat up to ~2.5mm, rep. delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2326 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa moderate autolyzed, up to ~0.6mm, ~30% thickness
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2426 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces glandular tissue ~20% tissue, rest stroma/mucosa. Recommend use for TMA/LCM studies
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2526 |
Skin, leg
|
PAXgene |
0
|
6 pieces, adherent fat up to ~1mm, rep. delineated; squamous epithelium ~50 microns
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10-20% fibrovascular tissue intermingled, rep delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, generally clean specimens, nubbin of ahderent fat up to ~0.5mm, delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-2926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, adherent fat up to ~2mm delineated
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-3026 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, fragmented. No abnormalities
|
Acceptable
|
|
GTEX-13CF2
|
61-70
|
Male
|
GTEX-13CF2-3126 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, one cortex, one cerebellum, encircled--beware upon sampling
|
Acceptable
|
|