GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities; nubbin of adherent fat up to ~1mm, delineated.
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-0826 |
Omentum
|
PAXgene |
1
|
2 pieces, no abnormalities; fascia/vascular elements are ~5-10% of tissue (rep delineated)
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-0926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, all cortex, trace adherent fat, delineated
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1026 |
Liver
|
PAXgene |
1
|
2 pieces, moderate passive congestion
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1126 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1226 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderate advanced saponification. Islets visible, rep, encircled, early degenerative changes
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.5mm, ~50-60% thickness.
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1626 |
Stomach
|
PAXgene |
2
|
6 pieces, target mucosa up to ~1mm, ~30-40% thickness; deeper (basal)mucosa better preserved (score 1)
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1726 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis appears reduced.
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1826 |
Prostate
|
PAXgene |
1
|
2 pieces, hyperplastic glandular pattern
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1926 |
Skin, leg
|
PAXgene |
0
|
6 pieces trace dermal fat (delineated); squamous epithelium is ~40-50 microns
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2026 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, fascia/vascular elements are ~10-20% of tissue (rep delineated)
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements are 10-15% of tissue
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2226 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, minute nubbins of adherent fat
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2326 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, rim of adherent fascia up to ~1mm; no atherosis
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2426 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, glomeruli present; tubules mildy autolyzed
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; focal trace mucosa, delineated
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, prominent gynecomastoid ductal (rep encircled) and stromal hyperplasia
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2726 |
Ileum
|
PAXgene |
1
|
6 pieces, abundant lymphoid aggregates are ~60-70% of tissue
|
Acceptable
|
|
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa is ~0.5mm, ~20% thickness; deeper (basal) mucosa better preserved (score 1)
|
Acceptable
|
|
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed, minimal internal fat, epidermis measures 35 microns
|
Acceptable
|
|
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature fat, one piece includes about 10% fibrous tissue/vessels
|
Acceptable
|
|
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-0326 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; ~50% is salivary gland, remainder is lip/stroma/skeletal muscle/fat
|
Acceptable
|
|