GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0126 |
Spleen
|
PAXgene |
1
|
2 pieces ~8x8mm
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces ~8x6
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0326 |
Heart
|
PAXgene |
1
|
2 pieces ~10x9mm. Minimal ischemic changes
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0426 |
Lung
|
PAXgene |
1
|
2 pieces ~1x7mm. Abundant vessels, bronchial/bronchiolar epithelial elements present, encircled. Minute focus of bronchial cartilage in one, delineated
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0526 |
Aorta
|
PAXgene |
1
|
6 pieces ~8x1.5mm
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces, one ~9x9mm with attached 7x3mm adherent/interstital fat; the other ~6x2mm with adherent 11x6mm fat, delineated. Parenchyma well preserved, few Islets seen. Patchy fibrosis.
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0726 |
Adrenal glands
|
PAXgene |
1
|
2 pieces one 8.5x7; one 8x2mm aliquot, all cortex. Smaller has attached ~7x7mm nubbin of fat
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces 9x1.5mm. Squamous mucosa, well preserved, is ~20% of thickness. Presumed switch with 0925 below.
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~9x3mm, all muscularis, presumed switch with 0825
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, ~8x4mm, all muscularis, excellent specimens
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1126 |
Stomach
|
PAXgene |
1
|
6 pieces, muscoa is ~20-25% of thickness; remarkably well-preserved
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1226 |
Omentum
|
PAXgene |
1
|
2 pieces ~8x7mm
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1326 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, ~9x2mm. Muscularis and fat, presumed sigmoid aliquots 1525 below
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~10x3mm. Mucosa variably but moderately preserved, ~10-15% of thickness
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1526 |
Ileum
|
PAXgene |
2
|
6 pieces ~9x2.5mm. Small bowel mucosa (delineated) with scattered lymphoid aggregates, encircled. Should be relabled as ileum, presumed switch with 1325 above
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1626 |
Prostate
|
PAXgene |
1
|
2 pieces, diffuse glandular hyperplasia. Large adherent 6mm fatty nubbin attached to one aliquot, encircled/delineated
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1726 |
Liver
|
PAXgene |
1
|
2 pieces, ~9x9mm. Diffuse macrovesicular steatosis involves 90+ % of specimens, which are well - preserved
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1826 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces ~10x10mm. Essentially all fat; a few trace ductal units noted, encircled
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces ~8x2.5mm. Squamous epithelium is ~2-3% of thickness; abundant adnexal structures (hair, sebaceous glands, a few epidermal inclusion cysts) are present, representative ones encircled
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2026 |
Testis
|
PAXgene |
0
|
2 pieces, ~9x7mm. Spermatogenesis present
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7x2mm. Up to ~1mm layer of fat on dermal surface of several, delineated. Squamous mucosa is ~2-3% of thickness
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~11x8 mm.
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~12x7mm. Minimal interstitial fat, excellent specimens.
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4mm d. 1-2mm adherent fat present on one, delineated. Nerve tissue encircled
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-2526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~1mm d. encircled; 75% of both aliquots (overall ~4x2mm) are attached vein and adipose tissue
|
Acceptable
|
|