GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-1426 |
Omentum
|
PAXgene |
1
|
2 pieces ~12x11mm
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-1526 |
Adrenal glands
|
PAXgene |
2
|
2 pieces ~12x9mm, all cortex, ~5% adherent fat, poorly preserved
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-1626 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces ~8x2mm, remarkabley well-preserved
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-1726 |
Ileum
|
PAXgene |
2
|
6 pieces ~7x1mm. Lymphoid elements weel seen in half (encircled). Pigmented foreign material noted (?tattoo) ensquared, in one
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~9x1.5mm. Mucosa reasonably well preserved, ~15-20% of thickness
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~12x4mm. All muscularis propria, excellent specimen
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2026 |
Prostate
|
PAXgene |
1
|
2 pieces ~10x8mm, glandular hyperplasia, focal PIN III, representative foc encircled
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2126 |
Testis
|
PAXgene |
2
|
2 pieces ~13x9mm. Spermatogenesis present, poorly preserved
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces ~14x11mm. Stromal fibrosis, rare ductal elements seen representative ones encircled
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces ~10x3mm. Squamous epithelium is ~1-2% thickness
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~9x7mm. Contaminant fragements of skin present, encircled
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2526 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~8x2mm. Squamous epithelium is ~2-3% of thickness
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~12x8mm. Intertitial fat/fibrous scar tissue is ~10% of specimens
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2726 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~5mm d. Clean specimen; interstital fat/fibrous tissue is ~15% of specimen
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2826 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~4mm d, clean specimens, but one aliqout with adherent fibsrovascular nubbin ~4x2mm
|
Acceptable
|
|
GTEX-VUSH
|
21-40
|
Male
|
GTEX-VUSH-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 9x4.5mm; up to 2 mm thick subcutaneous adipose in 5 pieces
|
Acceptable
|
|
GTEX-VUSH
|
21-40
|
Male
|
GTEX-VUSH-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 11x10 & 12x9mm; ~30% central defect in one; 10% in other
|
Acceptable
|
|
GTEX-VUSH
|
21-40
|
Male
|
GTEX-VUSH-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 12.5x11 & 11x9mm; prominent focal hemorrhages and interstital edema; <5% adipose
|
Acceptable
|
|
GTEX-VUSH
|
21-40
|
Male
|
GTEX-VUSH-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 5x3 & 5x3.5mm; <10% adipose
|
Acceptable
|
|
GTEX-VUSH
|
21-40
|
Male
|
GTEX-VUSH-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 3x2 & 3.5x2mm;1, 2mm artery and 0.6 mm vein in each; <10% adipose
|
Acceptable
|
|
GTEX-WCDI
|
51-60
|
Male
|
GTEX-WCDI-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~8x3mm. Fat is ~50% of all sections. Squamous mucosa is ~2% of thickness. Non adipose components circled by line in representative sections for guidance.
|
Acceptable
|
|
GTEX-WCDI
|
51-60
|
Male
|
GTEX-WCDI-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~12x10mm
|
Acceptable
|
|
GTEX-WCDI
|
51-60
|
Male
|
GTEX-WCDI-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 12x9. All fibroadipose tissue, no skeletal muscle present
|
Unacceptable
|
|
GTEX-WCDI
|
51-60
|
Male
|
GTEX-WCDI-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~6x4mm. Arteries encircled, adherent fibroadipose tissue present on both, ~30% of both
|
Acceptable
|
|
GTEX-WCDI
|
51-60
|
Male
|
GTEX-WCDI-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, one 7x3mm, one 10x1mm, both with extensive adherent fat; actual nerve delineated in both by drawing, fat is encircled
|
Acceptable
|
|