GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1426 |
Liver
|
PAXgene |
1
|
2 pieces; marked central fatty degeneration, perivenular and periportal fibrosis
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1526 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; only two pieces contain renal cortex (outlined)
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; 0.5mm thick stratified squamous epithelium and muscularis mucosae, congestion
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; muscularis, well trimmed
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1826 |
Adrenal glands
|
PAXgene |
3
|
2 pieces; severely autolyzed pancreas, not adrenal
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1926 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis , one piece contain ~15% external fat (outlined)
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; severly autolyzed mucosa and preserved muscularis
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; mostly muscularis and serosa; no evidence of mucosa or lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2326 |
Stomach
|
PAXgene |
2
|
6 pieces; muscularis, only tiny focus of totally autolyzed residual gastric mucosa (outlined)
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2426 |
Prostate
|
PAXgene |
2
|
2 pieces; moderate to severe autolysis, fibromuscular stroma and glandular component with sloughed lining epithelium
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2526 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis present
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; totally autolyzed mucosal remnants (arrows) and preserved target muscularis
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 1 piece shows dense fibrous stroma and scattered ductal structures, 2nd is composed of 50% fat and 50% fibrous tissue
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2826 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair-bearing skin with small amounts of periadnexal fat
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2926 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; 1 piece is salivary gland elements with mild chronic inflammation and detached nerve fragment (arrow), 2nd is ~10-15% salivary gland(outlined) surrounded by lip/stroma
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-3026 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; excessive white matter
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-3126 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; 2 are largely white matter
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-3226 |
Pituitary gland
|
PAXgene |
2
|
1 piece; moderate autolysis of adenohypophysis; interstitial fibrosis and focal calcification, rim of dense fibrous tissue with vessels consistent with dura mater (outlined)
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no dermal fat. Squmous epithelium is ~40 microns
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces. No dermal fat. Squamous epithelium is ~20-30 microns
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-0326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 15-20% fascia/vascular elements, rep. delineated
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-0426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, mild atorphy; ~30-40% interstitial fat/vasuclar elements, rep delineated
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-0626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no atherosis or adherent fat
|
Acceptable
|
 |