GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0826 |
Lung
|
PAXgene |
3
|
2 pieces ~8x5mm. Diffuse interstitial fibrosis, ? diffuse alveolar damage sequence, micro foci of acute inflammation encircled
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1926 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, 8x6 & 8x5mm; ~90% adipose; scarring; poorly preserved parenchyma scattered about; of limited value
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-2226 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 7x4mm; mucosa totally autolyzed; muscle not in good shape either
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1326 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 6x3mm; mucosa and submucosa, no muscularis
|
Acceptable
|
|
GTEX-WHSE
|
Other
|
Male
|
GTEX-WHSE-1926 |
Spleen
|
PAXgene |
3
|
2 pieces ~7x6mm. Congested, badly autolyzed
|
Acceptable
|
|
GTEX-WHSE
|
Other
|
Male
|
GTEX-WHSE-2526 |
Ileum
|
PAXgene |
3
|
5 pieces ~5x.15mm. Badly autolyzed
|
Acceptable
|
|
GTEX-WHSE
|
Other
|
Male
|
GTEX-WHSE-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~6x2.5mm. Mucosa sloughed or badly autolyzed
|
Acceptable
|
|
GTEX-WHSE
|
Other
|
Male
|
GTEX-WHSE-2726 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces ~8x1.5mm. 80% muscularis propria. Badly autolyzed
|
Acceptable
|
|
GTEX-WHSE
|
Other
|
Male
|
GTEX-WHSE-2826 |
Prostate
|
PAXgene |
3
|
2 pieces ~7x6mm. Glands badly autolyzed
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-1226 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces ~5x2mm. Mucosa completely sloughed
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-1726 |
Spleen
|
PAXgene |
3
|
2 pieces ~8x6mm, congested
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~7x2mm, mucosa near totally sloughed, badly autolyzed
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-2326 |
Ileum
|
PAXgene |
3
|
p4 ieces ~6x3mm though variably sized; mucoa completely autolyzed, prominent surviving lymphoid aggregates present, deliniated (representative)
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-2626 |
Vagina
|
PAXgene |
3
|
6 pieces ~8x3mm. Mucosa completely sloughed
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-2826 |
Stomach
|
PAXgene |
3
|
6 pieces ~8x1.5mm, near total autolysis, mucosa sloughed
|
Acceptable
|
|
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2026 |
Pancreas
|
PAXgene |
3
|
2 pieces, 8x7 & 9x8mm; tissue is unrecognizable due to high degree of autolysis and saponification of adipose
|
Unacceptable
|
|
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x2mm; mucosa = 3; muscularis = 2 (autolysis)
|
Acceptable
|
|
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, up to 6.5x2mm; mucosa (unwanted) and muscle (target) in all pieces
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-1026 |
Lung
|
PAXgene |
3
|
2 pieces ~7x4mm. Apparent emphysematous changes but extremly autolyzed
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces ~10x6mm, minimal adherent fat, saponification, Islets not well seen
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-1726 |
Liver
|
PAXgene |
3
|
pieces
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-1826 |
Adrenal glands
|
PAXgene |
3
|
2 pieces ~14x2mm, all cortex, each about 30-40% fat, delineated
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-1926 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces ~6x3mm, badly autolyzed
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-2126 |
Prostate
|
PAXgene |
3
|
2 pieces ~7x7mm; patchy marked chronic prostatitis, representative areas delineated; badly autolyzed glandular elements
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-2326 |
Ileum
|
PAXgene |
3
|
2 pieces ~4x3mm, <10% lymphoid elements, delineated; badly autolyzed
|
Acceptable
|
|