GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1026 |
Aorta
|
PAXgene |
1
|
6 pieces, adherent serosa/fat up to ~0.5mm on several sections
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, mixed fibrofatty/vascular/smooth muscle, not typical of pure esophageal muscularis, so therefore of uncertain provenance.
|
Unacceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces all adipose tissue, no ductal/lobular elements
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, fibroadipose/vascular/smooth muscle, no mucosa present. Uknown provenance.
|
Unacceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, generally all muscularis. Up to ~0.7mm adherent fatty layer on several sections
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-1826 |
Omentum
|
PAXgene |
1
|
2 pieces, minimal fibrous/vascular componenet; good specimens
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis propria, appropriate good specimens
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-2826 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, granular layer well defined; Purkinje cells show minimal ischemic damage
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-2926 |
Brain - cortex
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0126 |
Aorta
|
PAXgene |
1
|
6 pieces, adherent serosa up to ~0.5mm
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, micronodular goiter. Adherent fat on one , up to ~0.8mm
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all muscularis, good specimens
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0426 |
Liver
|
PAXgene |
1
|
2 pieces, diffuse macrovesicular steatosis involves ~ 50% of parenchyma
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
4 pieces, squamous mucosa is ~0.2mm thick, ~10% thickness. Lymphoid aggregates noted, delineated
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis, good specimens
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0726 |
Spleen
|
PAXgene |
1
|
2 pieces, moderate congestion
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0826 |
Omentum
|
PAXgene |
1
|
2 pieces, trace vascular structures in one, rep area delineated
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, excellent lymphoid aggregates some up to 1mm thick ~10% total specimen
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-1026 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa largely sloughed, minute foci remain, delineated
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-1126 |
Colon, sigmoid
|
PAXgene |
1
|
4 pieces, abundant muscularis, also mucosa present, ~10% thickness
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-1326 |
Colon, transverse
|
PAXgene |
1
|
4 pieces, small intestinal mucosa and muscularis. Uncertain location, can't be used for GTEx but should be retained for future studies
|
Unacceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-1426 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, gland components range from 90% to 20%, delineated in all 3, focally contaminating squamous mucosa and stroma
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, contaminating 'floaters' of small bowel mucosa present in block, delineated rep areas.
|
Acceptable
|
 |
GTEX-ZA64
|
21-40
|
Male
|
GTEX-ZA64-0126 |
Aorta
|
PAXgene |
1
|
6 pieces, up to ~0.5mm adherent serosa on most
|
Acceptable
|
 |
GTEX-ZA64
|
21-40
|
Male
|
GTEX-ZA64-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all cortex, well-preserved, a ~1mm aherent nubbin of fat on one, delineated.
|
Acceptable
|
 |