GTEX-TMZS
|
61-70
|
Male
|
GTEX-TMZS-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces up to 10x3 mm; well trimmed of subcutaneous adipose
|
Acceptable
|
 |
GTEX-TMZS
|
61-70
|
Male
|
GTEX-TMZS-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces 13x6 & 11x8 mm; central holes in large aliquots
|
Acceptable
|
 |
GTEX-TMZS
|
61-70
|
Male
|
GTEX-TMZS-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 10x9 & 8x5 mm; ~20% interspersed adipose in smaller aliquot, <5% in larger; no obvious atrophy
|
Acceptable
|
 |
GTEX-TMZS
|
61-70
|
Male
|
GTEX-TMZS-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 9x4 & 8x5 mm; Organized recanalized thrombus occupies entire lumen and ~50% of aliquot; calcium ~30%, little normal arterial wall in one aliquot; other has little normal wall as well with large recent thrombus and mural calcium. No patent lumen in either. (See photo)
|
Acceptable
|
 |
GTEX-TMZS
|
61-70
|
Male
|
GTEX-TMZS-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 8x3 & 4x4 mm; TENDON, not nerve
|
Unacceptable
|
 |
GTEX-U3ZG
|
51-60
|
Male
|
GTEX-U3ZG-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7x2.5mm. Squamous epithelium is ~2-3% of thickness
|
Acceptable
|
 |
GTEX-U3ZG
|
51-60
|
Male
|
GTEX-U3ZG-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~10x8mm.
|
Acceptable
|
 |
GTEX-U3ZG
|
51-60
|
Male
|
GTEX-U3ZG-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~8x8mm. ~15-20% interstitial fat
|
Acceptable
|
 |
GTEX-U3ZG
|
51-60
|
Male
|
GTEX-U3ZG-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~5mm d. Minimal (`0.5mm) discontinuous foci of adherent fat, reasonably clean specimens
|
Acceptable
|
 |
GTEX-U3ZG
|
51-60
|
Male
|
GTEX-U3ZG-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~2.5mm d. Subtotally occlusive calcified atherosclerosis. Good clean specimens
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0126 |
Spleen
|
PAXgene |
1
|
2 pieces ~10x8mm
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces ~10x9mm. Patch Hashimoto's thyroiditis, regressive areas noted
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0326 |
Heart
|
PAXgene |
1
|
2 pieces ~10x8mm. Minimal ischemic damage
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces ~3mm. Minimal atherosclerosis
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0526 |
Lung
|
PAXgene |
2
|
2 pieces ~8x8mm. Atalectatic, focal lymphoid follicle/intrapulmonary lymph node noted, encircled
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0626 |
Aorta
|
PAXgene |
1
|
6 pieces ~9x1.5mm. Minimal atherosis
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0726 |
Pancreas
|
PAXgene |
3
|
2 pieces ~9x8mm. Marked autolysis & saponification. Islets seen; one encircled, all badly autolyzed
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0826 |
Urinary bladder
|
PAXgene |
3
|
6 pieces ~7x5mm. Urothelium largely sloughed; a few residual foci up to ~80 microns thick
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0926 |
Prostate
|
PAXgene |
1
|
2 pieces ~7x6mm. Largely peripheral stroma/fat, adherent smooth muscle, minimal autolyzed glandular elements
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~6x1.5mm. Squamous mucosa up to ~200 microns thick or ~15%
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~10x4mm
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-1226 |
Stomach
|
PAXgene |
3
|
6 pieces ~9x3.5mm. Mucosa totally autolyzed, partly sloughed
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~8x3mm. Mucosa remarkably well-preserved, ~10-20% of thickness
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-1426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces ~10x6mm. Numerous ductal units visible, some encircled, evidence of gynecomastoid hyperplasia
|
Acceptable
|
 |
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-1526 |
Testis
|
PAXgene |
1
|
2 pieces ~10x8mm. Spermatogenesis markedly reduced
|
Acceptable
|
 |