GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-1326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, ~4.5-5mm d. Excellent clean specimens, minimal fat.
|
Acceptable
|
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-1426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~10x7mm, <5% interstital fat
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0126 |
Spleen
|
PAXgene |
1
|
2 pieces ~9x9mm.
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, ~7x7mm. NOTE: unusually well-preserved with prominent medulla, also unusually well-preserved
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0326 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, ~7x2mm. Multifocal malignancy, favor primary renal papillary renal cell. Can't be used ("unacceptable") for GTEx but should be retained as potentially valuable for future research.
|
Unacceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces ~8x7mm. Islets well visualized, representative ones encircled. Minimal fat/saponification; well preserved specimen
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0526 |
Urinary bladder
|
PAXgene |
2
|
4 pieces ~5x3mm, 2 with partallly sloughed urothelium, where present <1% of thickness
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0626 |
Kidney - medulla
|
PAXgene |
1
|
2 pieces, ~8x5mm. NOTE: Each aliquot is ~40% cortex
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~8x5mm, NOTE: one with adherent skin
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0826 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~8x6mm, minimal interstitial fat
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0926 |
Stomach
|
PAXgene |
1
|
6 pieces ~8x3mm. Mucosa well-presereved but only focally present in 4 aliquots, where prsent ~20% of thickness
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1026 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, ~2.5mm d. Good clean specimen
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1126 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, ~3.5mm, good clean specimen, minimal fat
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces 7x4mm. No mucosa, just muscle. May be used once relabeled
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~7x4mm. Mucosa unusually well-preserved; ~10% of thickness
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1426 |
Prostate
|
PAXgene |
1
|
2 pieces, no prostate present, only fat/vascular tissue, unknown provenance.
|
Unacceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1526 |
Testis
|
PAXgene |
2
|
2 pieces, ~8x5mm. Spermatogenesis is present but poorly preserved
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1626 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7x3mm. Squamous epithelium is ~2-3% of thickness
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1726 |
Liver
|
PAXgene |
1
|
2 pieces ~8x7mm. Minimal steatosis
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 7x7mm. Ductal elements (rare) present, representive ones encircled.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7.5x3mm. Squamous epithelium is ~2-3% of thickness.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0226 |
Adipose tissue
|
PAXgene |
0
|
2pieces, ~7x6mm. Mixed fibrous-adipose tissues.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~12x10mm. ~40-50% interstitial fat, mildly atrophic-appearing skeletal muscle fibers.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4.5mm d. Good clean specimens, minimal fat.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~2.5mm d. Marked circumferential calcification, pattern suggests calcified atherosclerotic deposits rather than Monckeberg's medial sclerosis.
|
Acceptable
|
|