GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-0926 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature fat, central defects (?poor fixation)
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1026 |
Heart
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; artery represents ~10-15% of 1 piece, rest is extraneous tissues (fibrous/fat/vein/nerve)
|
Unacceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1226 |
Pancreas
|
PAXgene |
1
|
2 pieces; islets are well visualized
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces: focus of lymphocytes, detached fragments of myocardium
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1426 |
Spleen
|
PAXgene |
0
|
2 pieces; includes capsule (target is 5mm below capsule)
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1526 |
Ovary
|
PAXgene |
0
|
2 pieces; 1 piece is 70% vessels and fibrocollagenous stroma
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1626 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; target muscularis, two small fragments of residual mucosa
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1726 |
Uterus
|
PAXgene |
1
|
2 pieces; myometrium
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1826 |
Vagina
|
PAXgene |
1
|
6 pieces (fragmented); mostly stroma with skeletal muscle, only 2 pieces include partially denuded epithelium
|
Unacceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; minor representation of muscularis, predominantly submucosa
|
Unacceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2026 |
Stomach
|
PAXgene |
1
|
6 pieces; variable representation of mucosa, submucosa, and muscularis
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; partially autolyzed mucosa, only scattered lymphoid aggregates, and muscularis (not target)
|
Unacceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, small strip of residual mucosa
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 20-30% fat, remainder is fibrocollagenous tissue with rare ducts, focus of microcalcification
|
Acceptable
|
 |
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2526 |
Minor salivary glands
|
PAXgene |
0
|
3 pieces; 0, 20, and 40% salivary gland elements, remainder is fat, nerve, skeletal muscle, and vessels
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; 1 with 30% external fat, other with 5% fat
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0226 |
Lung
|
PAXgene |
1
|
2 pieces; well preserved without lesions
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0326 |
Pancreas
|
PAXgene |
0
|
2 pieces; 1 piece has 25% external fat; both have 5% internal fat
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0426 |
Spleen
|
PAXgene |
1
|
2 pieces; mild congestion; numerous foamy macrophages lining sinusoids
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0526 |
Aorta
|
PAXgene |
1
|
6 pieces; no plaques; loose adventitia focally
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0626 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; larger piece with 20% fibroadipose content; smaller with 60%
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0726 |
Heart
|
PAXgene |
1
|
2 pieces; patchy myocardial scarring comprising 5%
|
Acceptable
|
 |
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-0826 |
Coronary artery
|
PAXgene |
0
|
2 pieces; concentric mild to moderate fibrous plaques
|
Acceptable
|
 |