GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-0926 |
Omentum
|
PAXgene |
1
|
2 pieces, 13x10 and 9x9mm; multiple penetrating small vessels
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
1 piece (6x1mm). Squamous mucosa is ~0.5mm thick, correlated with -1025 aliquots
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x4mm; mainly muscularis, a few with adherent serosa containing vessels (delineated) or peripheral nerve (ensquared)
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, ranging from 7x5 to 10x4mm; muscularis, good specimens
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1426 |
Stomach
|
PAXgene |
1
|
1 piece, all muscularis with minute adherent fragment of well-preserved mucsoa; correlates acceptably with 1425
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1526 |
Testis
|
PAXgene |
1
|
2 pieces, 10x7 and 9x6mm; spermatogenesis is present
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1626 |
Prostate
|
PAXgene |
1
|
2 pieces, 10x7.5 and 9x7mm; not prostate but seminal vesicle/stroma
|
Unacceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1726 |
Ileum
|
PAXgene |
1
|
6 pieces, mucosa and stroma, ~5-10% lylmphoid elements
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1926 |
Colon, transverse
|
PAXgene |
1
|
1 piece (10x5mm), correlates with 1925
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ranging from 7x4 to 8x5mm; <1% mucosa; mainly muscularis and serosa
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 8x8 and 9x6mm; end-stage Hashimoto's thyroiditis, dense fibrous scarrning and numerous lymphoid follicles
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-0926 |
Lung
|
PAXgene |
1
|
2 pieces, 9x7 and 7x7mm; moderate congestion/atalectasis
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-1026 |
Heart
|
PAXgene |
1
|
2 pieces, 9x9 and 9x8mm; several remote infarcts, ~1x0.5m,m, delineated
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 3x1.5 and 2.5x2mm; subtotally occlusive atherosis, ave d. ~2mm. Adherent fat, disccontinuous, on both, ~0.5mm
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-1226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 9x7 and 8x7mm.
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-1326 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 10x2mm; marked focally calcified atherosis, focally calcified, rep. areas delineated
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-1426 |
Omentum
|
PAXgene |
1
|
2 pieces, both 8x7mm; ~10% fibrous tissue, rep areas delineated
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
1 piece, correlates with -1625
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, from 6x3 to 9x4mm; all muscularis, good specimens
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-2126 |
Stomach
|
PAXgene |
1
|
5 pieces, from 6x2 to 9x2mm; all gastric mucosa/muscuarlis; may be used for GTEx once relabeled correctly
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x2mm. Muscualris; a few nubbings of adherent fat, delineated, on 2
|
Acceptable
|
 |
GTEX-YF7O
|
51-60
|
Male
|
GTEX-YF7O-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, 12x10 and 15x13mm; 1 has 30% fat
|
Acceptable
|
 |
GTEX-YF7O
|
51-60
|
Male
|
GTEX-YF7O-0226 |
Coronary artery
|
PAXgene |
1
|
4 pieces, each ~5x4mm; sclerotic plaque and medial calcification
|
Acceptable
|
 |
GTEX-YF7O
|
51-60
|
Male
|
GTEX-YF7O-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, from 7x2 to 9x2.5mm; well trimmed
|
Acceptable
|
 |
GTEX-YF7O
|
51-60
|
Male
|
GTEX-YF7O-0426 |
Heart
|
PAXgene |
1
|
2 pieces, 12x8.5 and 11x8mm; well trimmed
|
Acceptable
|
 |