GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-1926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; well preserved epithelium; several submucosal glands
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2226 |
Testis
|
PAXgene |
1
|
2 pieces; no normal spermatogenesis; maturation arrested; tubules not hyalinized; no Leydig cell hyperplasia
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2326 |
Prostate
|
PAXgene |
2
|
2 pieces; glands moderately autolyzed
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed, muscle intact; pericolonic fat is atrophic as in omentum
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2526 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid tissue in 3 pieces
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2726 |
Brain - cortex
|
PAXgene |
1
|
5 pieces
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2826 |
Brain - cerebellum
|
PAXgene |
1
|
5 fragmented pieces
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece; no neural tissue in this cut
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0126 |
Liver
|
PAXgene |
1
|
2 pieces; includes capsule (target is 1cm below capsule), mild steatosis and congestion
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; some plaque
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0326 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, some interstitial fibrosis
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0826 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; target muscularis
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0926 |
Pancreas
|
PAXgene |
2
|
2 pieces; includes 10-15% mostly attached fat, inter/intralobular fibrosis
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1026 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated fat
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1126 |
Lung
|
PAXgene |
1
|
2 pieces; includes portion of pleura (not target region), some collapse, some widened airspaces, congestion, edema
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1226 |
Stomach
|
PAXgene |
2
|
6 pieces; variably preserved mucosa (2-3), submucosa, and muscularis (1)
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mucosa, submucosa, muscularis
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; muscularis, mild to moderate autolysis
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; some intimal thickening, focal calcifications
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-2026 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; predominantly fat, 5 and 10-15% fibrous tissue/larger vessels
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-2126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; includes up to ~10% internal fat
|
Acceptable
|
 |