GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0926 |
Stomach
|
PAXgene |
1
|
6 pieces up to 6x4 mm; 3 have mainly mucosa, 1 largely muscle
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6x3 mm; 3 have mucosa without muscularis, 3 have muscularis without mucosa
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1126 |
Prostate
|
PAXgene |
1
|
2 pieces 9x7 & 8x7 mm; hyperplasia; one piece with ~30% adipose7on one side
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1226 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 8x5mm; little epithelium, what is present is largely sloughed; lots of tissue fractures
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1326 |
Testis
|
PAXgene |
1
|
2 pieces 8x7 & 8x6 mm; moderately reduced spermatogenesis
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces 11x4 & 9x7 mm; mild patchy fibrosis; ~10% adipose at one edge; scattered adipose in parenchyma
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces ~2 mm diameter; no lesions; cleaned of adipose
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 10x7 & 9x9 mm; no adipose
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 6x3 & 5x3 mm; virtually fat free;
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1826 |
Adipose tissue
|
PAXgene |
1
|
pieces 10x5 & 11x9 mm; adipose tissue and an embedded 3x1 mm nerve
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1926 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x2 mm; most subcutaneous adipose removed; considerable tissue fracture
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0126 |
Testis
|
PAXgene |
2
|
2 pieces 9x5 & 8x6 mm; slightly reduced spermatogenesis
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0226 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 10x7 & 8x8 mm; patchy fibrosis; ~40% adipose in aliquots
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 5x3 & 5x4 mm; ~20 & 40% peripheral adipose
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces 4 mm in diameter; no extraneous adipose
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0526 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x3.5 mm; subcutaneous adipose up to 0.6mm
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 9x8 & 8x7 mm; holes in central 20%
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0726 |
Thyroid gland
|
PAXgene |
3
|
2 pieces 7x6 & 7x6 mm
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0826 |
Lung
|
PAXgene |
2
|
2 pieces 8x8 & 8x7 mm; numerous 'heart failure' cells, moderate alveolar dilatation; patchy alveolar hemorrhage
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0926 |
Heart
|
PAXgene |
2
|
2 pieces 9x4 & 7x7 mm; fiber fracture autolysis artifact
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1026 |
Aorta
|
PAXgene |
1
|
6 pieces up to 1.5x8 mm; flat plaques up to 0.4mm
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces 2x2 mm; 1 ~80% adipose; other 100% adipose
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1226 |
Spleen
|
PAXgene |
2
|
2 pieces 8x8 & 10x6 mm; moderate congestion
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x2 mm; squamous mucosa well preserved; submucosal glands moderately autolyzed
|
Acceptable
|
 |
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 7x3 mm; 2 have submucosal glands <10% of each aliquot
|
Acceptable
|
 |