GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces. 16x9 & 14x6mm; Ducts and lobules present. Larger piece good; smaller is mainly adipose.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1926 |
Skin, leg
|
PAXgene |
1
|
6 pieces. up to 10x3.5mm; 5 of 6 have well trimmed deep aspect.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2026 |
Adipose tissue
|
PAXgene |
1
|
2 pieces. 12x9.5 & 12.5x11mm;
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces. 19x12 & 16.5x15mm; specimen sequenced and fingerprint confirmed as match to other donor specimens
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2226 |
Nerve - tibial
|
PAXgene |
1
|
4 pieces. up to 6x4mm; Well dissected.
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0226 |
Omentum
|
PAXgene |
1
|
2 pieces, 20x13 & 18x12mm;
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 11x10 & 12.5x9mm; multiple small (1-2mm) colloid cysts
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 10x3mm; ~0.2mm layer discontinuous atherosis
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 3x2 & 3x2mm; subtotally occlusive, calcifying atherosclerosis. One aliquot has ~1mm adherent fatty nubbin, delineated
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0626 |
Heart
|
PAXgene |
1
|
2 pieces, 13x8 & 15x12mm; remarkably minimal interstitial fibrosis given degree of atherosclerosis of coronary artery
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0726 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 10x7 & 6x5mm;
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0826 |
Lung
|
PAXgene |
1
|
2 pieces, 10x7 & 12.5x8.5mm; emphysematous changes, carbon particle deposition, rep foci delineated
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0926 |
Liver
|
PAXgene |
1
|
2 pieces, 10x10 & 11x10mm; mild-moderate macrovesicular steatosis involving ~30-40% of parenchyma
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces, 14x12 & 14x11mm; incidental neuroendocrine tumor ~2.5mm d (Islet cell tumor), encircled. Well visualized islets, rep. ones delineated.
|
Unacceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-1126 |
Spleen
|
PAXgene |
1
|
2 pieces, 11x10 & 13x11mm;
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-1226 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, up to 7x3mm; glomeruli seen; patchy chronic interstitial nephritis; lymphoid aggregates delineated (rep).
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 12x4mm; all muscle; good specimens
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 9x3mm; all muscle, good specimens. Sub-mucosal mucinous glands noted in several sections, rep. ones delineated
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 10x2mm; squamous mucosa is ~10-15% of thickness
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 16x13 & 17x12mm; mainly fibroadipose tissue, a few atrophic ductal elements noted, rep ones delineated
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-2226 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, 16x10 & 18x9mm; largely squamous mucosa (inner lip) and stroma, minute glands are <5% tissue volume
|
Unacceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-2426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 12x11 & 15x7.5mm; ~19% fibrous tissue, delineated
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-2526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 9x9 & 9x7mm; <1% interstitial fat
|
Acceptable
|
|
GTEX-Y5V6
|
61-70
|
Male
|
GTEX-Y5V6-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 8x8 & 9x7mm; moderate congestion
|
Acceptable
|
|
GTEX-Y5V6
|
61-70
|
Male
|
GTEX-Y5V6-0226 |
Lung
|
PAXgene |
1
|
2 pieces, 8x7 & 8x6.5mm; focal emphysema
|
Acceptable
|
|