GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2026 |
Urinary bladder
|
PAXgene |
3
|
6 pieces ~8x3mm, urothelium completely sloughed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2326 |
Fallopian tube
|
PAXgene |
3
|
2 pieces ~2.5mm d, mucosa completely sloughed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2526 |
Uterus
|
PAXgene |
3
|
2 pieces /`8x8mm, endometrium totally autolyzed in one, absent in the other
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~7x2mm. Mucosa with near-total autolysis
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1426 |
Pancreas
|
PAXgene |
3
|
2 pieces ~7x7mm, marked autolysis, post mortem saponification
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~6x2mm. Mucosa completely autolyzed/sloughed
|
Acceptable
|
|
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-0726 |
Thyroid gland
|
PAXgene |
3
|
2 pieces 7x6 & 7x6 mm
|
Acceptable
|
|
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces 8x8 & 6x6 mm; poor parenchymal preservation and saponification of adjacent fat (~10 and 20% of aliquots
|
Acceptable
|
|
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1626 |
Adrenal glands
|
PAXgene |
3
|
3 pieces 10x5 & 9x8 mm; ~20% adjacent adipose
|
Acceptable
|
|
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-1826 |
Kidney - medulla
|
PAXgene |
3
|
2 pieces 9x7 & 8x6 mm; all medulla no cortex
|
Acceptable
|
|
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-2026 |
Stomach
|
PAXgene |
3
|
6 pieces up to 8x2.5 mm; glands completely autolyzed
|
Acceptable
|
|
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 7x15 mm; glands completely sloughed
|
Acceptable
|
|
GTEX-T2YK
|
51-60
|
Male
|
GTEX-T2YK-2326 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 9x4 mm; all epithelium sloughed
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-1126 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 7x4 mm; epithelium totally sloughed; muscle preserved; abundant adipose (up to 3 mm thick) on deep side
|
Acceptable
|
|
GTEX-T5JC
|
21-40
|
Male
|
GTEX-T5JC-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 7x4 mm; mucosa completely autolyzed, muscle moderately autolyzed
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2126 |
Prostate
|
PAXgene |
3
|
2 pieces 11x5 & 9x9 mm; glands totally autolyzed in 9x9mm piece; other piece is fibromuscular (both smooth and striated muscle (peripheral to prostatic parenchyma)
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2226 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8x3 mm; epithelium sloughed; one piece 80% adipose
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2 mm; mucosa largely autolyzed
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces 7x7 & 8x6 mm; severely autolyzed; 4x1 mm adipose at one edge
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-1726 |
Stomach
|
PAXgene |
3
|
6 pieces up to 7x3 mm; mucosa totally autolyzed; wall moderately autolyzed
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2 mm; mucosa totally autolyzed; wall moderately autolyzed
|
Acceptable
|
|
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0726 |
Pancreas
|
PAXgene |
3
|
2 pieces ~9x8mm. Marked autolysis & saponification. Islets seen; one encircled, all badly autolyzed
|
Acceptable
|
|
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-0826 |
Urinary bladder
|
PAXgene |
3
|
6 pieces ~7x5mm. Urothelium largely sloughed; a few residual foci up to ~80 microns thick
|
Acceptable
|
|
GTEX-U3ZH
|
21-40
|
Male
|
GTEX-U3ZH-1226 |
Stomach
|
PAXgene |
3
|
6 pieces ~9x3.5mm. Mucosa totally autolyzed, partly sloughed
|
Acceptable
|
|
GTEX-U3ZM
|
41-50
|
Male
|
GTEX-U3ZM-0726 |
Pancreas
|
PAXgene |
3
|
2 pieces 10x9mm. Badly autolyzed with saponification. Islets discernable but totally autolyzed
|
Acceptable
|
|