GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1626 |
Spleen
|
PAXgene |
2
|
2 aliquots, ~6.5x6mm. Marked congestion
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1726 |
Adrenal glands
|
PAXgene |
1
|
2 aliquots, ~16x3mm. All cortex
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, 7x3mm.
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-1926 |
Kidney - medulla
|
PAXgene |
2
|
2 aliquots, ~9x6mm. LDACC alert: All of one and ~60% of the other are pure medulla (encircled) ~40% of one is cortex. Tubules badly autolyzed.
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-2026 |
Prostate
|
PAXgene |
1
|
2 aliquots, ~9x7mm. Diffuse glandular hyperplasia. Mucosa unusually well-preserved
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-2126 |
Urinary bladder
|
PAXgene |
2
|
6 pieces ~7x2mm. Urothelium largely sloughed, where evaluable is 1-2% of thickness
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-2226 |
Stomach
|
PAXgene |
3
|
6 pieces, ~6x2.5mm. Mucosa badly autolyzed, 30-50% of thickness
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~7.5x1.5mm. Mucosa badly autolyzed, 10-20% of thickness
|
Acceptable
|
|
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-2426 |
Testis
|
PAXgene |
1
|
2 aliquots, ~8x5mm. Spermatogenesis visible but appears slightly reduced
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0126 |
Testis
|
PAXgene |
1
|
1 pieces 8x6 & 6x5 mm; reduced spermatogenesis
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 6x6 & 6x5 mm; NO THYROID; only skeletal muscle
|
Unacceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0326 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces 9x9 & 8x7 mm; several foci of mammary ducts in abundant fibroadipose tissue
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces 5x2 & 4x1 mm; NO ARTERY; all adipose and focal myocardium.
|
Unacceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0526 |
Heart
|
PAXgene |
1
|
2 pieces 7x6 & 7x5 mm; <10% internal adipose
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0626 |
Lung
|
PAXgene |
1
|
2 pieces 7x6 & 7x5 mm; moderate venous congestion; moderate alveolar fluid; no pneumonia
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0726 |
Aorta
|
PAXgene |
1
|
6 pieces up to 9x2 mm; focal plaque and small dissection
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 6x2.5 mm; 3 have up to 1 x2 mm muscularis propria at edge
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 7x3 mm;
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1026 |
Skin, leg
|
PAXgene |
0
|
6 pieces up to 6x3 mm; minimal subcutaneous adipose
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces 7x5 & 7x6 mm: well fixed;
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1226 |
Pancreas
|
PAXgene |
1
|
2 pieces 10x7 & 9x7 mm; ~10-20% adipose within aliquot
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces 11x6 & 9x9 mm;~ 20-30% peripheral adipose; largely cortex
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1426 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces up to 8x3 mm; all cortex; good glomeruli
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1526 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces 8x7 & 7x6 mm; <5% focus of cortex at one edge
|
Acceptable
|
|
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-1626 |
Liver
|
PAXgene |
1
|
2 pieces 8x5 & 7x7 mm; not congested
|
Acceptable
|
|