GTEX-XPVG
|
51-60
|
Male
|
GTEX-XPVG-1726 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 6x6mm; 3 small mucosal lymphoid nodules; well preserved mucosa
|
Acceptable
|
|
GTEX-XPVG
|
51-60
|
Male
|
GTEX-XPVG-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 11x4mm; 3 with good mucosa; 4 with muscularis; 1 with only adipose
|
Acceptable
|
|
GTEX-XPVG
|
51-60
|
Male
|
GTEX-XPVG-2026 |
Prostate
|
PAXgene |
1
|
2 pieces. 7x7 & 11x5mm; well preserved glands; 1 piece with 2 mm focus of ganglion cells; 1 with 1mm external adipose
|
Acceptable
|
|
GTEX-XPVG
|
51-60
|
Male
|
GTEX-XPVG-2226 |
Testis
|
PAXgene |
1
|
2 pieces, 12x9 7 11x7mm; spermatogenesis
|
Acceptable
|
|
GTEX-XPVG
|
51-60
|
Male
|
GTEX-XPVG-2626 |
Skin, leg
|
PAXgene |
1
|
6 pieces. up to 5x4.5mm; well trimmed
|
Acceptable
|
|
GTEX-XPVG
|
51-60
|
Male
|
GTEX-XPVG-2826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces. 4x4 & 6x5mm; well trimmed, but with 20% internal fibroadipose
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-0126 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 9x1mm; minimal atherosis
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 7x7 & 9x8mm; no thyroid parenchyma, strap/skeletal muscle only.
|
Unacceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 7.5x3mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 7x2mm; squamous mucosa ~20 % ot thickness
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x3mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 10x9 & 8x8mm; focal skeletal muscle in both aliquots up to ~2x1mm, delineated
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-1426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8x5mm; squamous epithelium is ~1-2% thickness
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-1526 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 7x4mm; squamous epithelium is ~1-2% thickness
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-1626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 9.5x8 & 8x7mm;
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-2426 |
Omentum
|
PAXgene |
1
|
2 pieces, 11x7 & 10x9mm; incidental 05mm lymph node present, encircled
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 7x2mm; ~50% target muscularis present, rest is fat/stroma, rep target tissue delineated
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-0126 |
Heart
|
PAXgene |
1
|
2 pieces, 9x6 & 7x7mm; no adipose
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 7x7 & 11x6mm; up to 0.4mm external adipose focally
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x3 & 3x2mm; moderate eccentric atheromatous plaques; up to 0.4 mm external adipose
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-0426 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 8x2.5mm; 1 piece without epidermis (in this cut). most subcutaneous adipose trimmed
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 10x8 & 11x7.5mm; well trimmed, but 10-20% internal adipose
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-0926 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 7x3mm; 1 of 6 without epidermis [in this section; could be on another surface]
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-1026 |
Testis
|
PAXgene |
1
|
2 pieces, 8.5x6 & 8x7mm; spermatogenesis
|
Acceptable
|
|
GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-1126 |
Lung
|
PAXgene |
1
|
2 pieces, 8x8 & 8x7mm; well preserved, noninflamed lung; 1 piece has pleura with subpleural pigmented macrophages.
|
Acceptable
|
|