GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces 5x2 & 4x1 mm; NO ARTERY; all adipose and focal myocardium.
|
Unacceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0926 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, all adipose tissue, unknown origin. Cannot be used for GTEx study
|
Unacceptable
|
|
GTEX-S3XE
|
51-60
|
Male
|
GTEX-S3XE-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 14x7 & 14x^ mm; severe Hashimoto's thyroiditis
|
Unacceptable
|
|
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1026 |
Fallopian tube
|
PAXgene |
1
|
2 pieces 7x4 mm; NO fallopian tube; only smooth muscle, vessels and stroma
|
Unacceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1126 |
Fallopian tube
|
PAXgene |
1
|
2 aliquots, artery, not fallopian tube. Unknown provenance.
|
Unacceptable
|
|
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-0826 |
Thyroid gland
|
PAXgene |
2
|
2 aliquots, ~6x6mm. INCORRECT TISSUE: SKELETAL MUSCLE, UNCERTAIN PROVENANCE.
|
Unacceptable
|
|
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-0126 |
Thyroid gland
|
PAXgene |
0
|
2 aliquots, one is all fat/skeletal muscle, the other about 50% thyroid.
|
Unacceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0326 |
Coronary artery
|
PAXgene |
1
|
1 aliquot ~3x3mm, 90+% fat/myocardium surrounding 0.5x1mm vessel, too small for accurate isolation
|
Unacceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1626 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all fat, not adrenal, not suitable for analysis
|
Unacceptable
|
|
GTEX-TKQ1
|
21-40
|
Male
|
GTEX-TKQ1-0826 |
Prostate
|
PAXgene |
1
|
2 pieces, not prostate but seminal vesicle
|
Unacceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0326 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, ~7x2mm. Multifocal malignancy, favor primary renal papillary renal cell. Can't be used ("unacceptable") for GTEx but should be retained as potentially valuable for future research.
|
Unacceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1426 |
Prostate
|
PAXgene |
1
|
2 pieces, no prostate present, only fat/vascular tissue, unknown provenance.
|
Unacceptable
|
|
GTEX-TMZS
|
61-70
|
Male
|
GTEX-TMZS-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 8x3 & 4x4 mm; TENDON, not nerve
|
Unacceptable
|
|
GTEX-U412
|
61-70
|
Male
|
GTEX-U412-1226 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, minimal evident muscle; edematous fat/fibrous tissue, badly autolyzed, uncertain provenance
|
Unacceptable
|
|
GTEX-U412
|
61-70
|
Male
|
GTEX-U412-1326 |
Esophagus - muscularis
|
PAXgene |
3
|
6 pieces,several with badly autolyzed ? mucosa/ inflammatory debris; unusually severe autolysis makes assessment impossible
|
Unacceptable
|
|
GTEX-U412
|
61-70
|
Male
|
GTEX-U412-2326 |
Kidney - medulla
|
PAXgene |
3
|
2 pieces, 50% fat an/or cortex with end-stage chronic fibrosing glomerulonepritis
|
Unacceptable
|
|
GTEX-U8T8
|
51-60
|
Male
|
GTEX-U8T8-1526 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, up to 8x2mm; only adipose and a fibrous border; no muscle or mucosa
|
Unacceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2826 |
Ileum
|
PAXgene |
3
|
6 pieces. up to 6x1.5mm; mucosa autolyzed, virtually no lymphoid tissue present; muscularis present
|
Unacceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, 13x10 & 13x12mm; All adipose tissue, no adrenal tissue
|
Unacceptable
|
|
GTEX-WCDI
|
51-60
|
Male
|
GTEX-WCDI-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 12x9. All fibroadipose tissue, no skeletal muscle present
|
Unacceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-1726 |
Prostate
|
PAXgene |
1
|
2 pieces, 8x5 & 10x9.5mm; no prostate, only fibroadipose tissue
|
Unacceptable
|
|
GTEX-WHSB
|
41-50
|
Male
|
GTEX-WHSB-1426 |
Prostate
|
PAXgene |
1
|
2 pieces NOT PROSTATE seminal vesicle; not approved for GTEx
|
Unacceptable
|
|
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2026 |
Pancreas
|
PAXgene |
3
|
2 pieces, 8x7 & 9x8mm; tissue is unrecognizable due to high degree of autolysis and saponification of adipose
|
Unacceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces fibroadipose tissue, no vessel present
|
Unacceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1126 |
Coronary artery
|
PAXgene |
2
|
2 pieces, 3.5x3 & 3x2mm; severe atheromatous and calcific changes; no normal tissue
|
Unacceptable
|
|