GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-2126 |
Prostate
|
PAXgene |
1
|
2 ~8x8mm aliquots. Prominent glandular hyperplasia; foci of cystic atrophy
|
Acceptable
|
 |
GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-2226 |
Urinary bladder
|
PAXgene |
1
|
6 ~8.5x4mm pieces; urothelium completely sloughed/denuded
|
Acceptable
|
 |
GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-2326 |
Skin, leg
|
PAXgene |
0
|
6 ~8.5x2.5mm pieces; squamous epithelium is ~1-3% of thickness
|
Acceptable
|
 |
GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-2426 |
Adipose tissue
|
PAXgene |
1
|
2 ~8x8mm aliquots
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 10x7 & 11x6 mm; capsule present on one piece (aliquot should be 5 mm beneath capsule)
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, 9x7 & 9x7 mm; 1 with ~20% nerves and ganglion cells; other with 50% adipose tissue centrally
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0326 |
Heart
|
PAXgene |
1
|
2 pieces, 9x7 & 9x7 mm; 1 has ~10% adipose
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0426 |
Aorta
|
PAXgene |
0
|
6 pieces up to 8.6x1.5 mm; minimal intimal thickening
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0526 |
Lung
|
PAXgene |
1
|
2 pieces, 10x7 & 8x5 mm; patchy emphysema
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 9x9 & 10x5 mm
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0726 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces up to 10x5.6 mm;
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
3 pieces up to 6.4x4.6 mm; 1 has prominent muscularis mucosae
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-0926 |
Pancreas
|
PAXgene |
1
|
2 pieces 7.9x7.7 & 9x5 mm; 1 with 60%, other 10% adipose
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1026 |
Stomach
|
PAXgene |
1
|
6 pieces up to 8x4.5 mm; all have had their mucosa removed so that only the muscularis and submucosa remain
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 8x5 mm; 5 of 6 have mucosa
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1226 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 10x5.6 mm; epithelium largely sloughed
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1326 |
Prostate
|
PAXgene |
1
|
2 pieces, 10.7x8 & 9x8.6 mm; 1 has excellent glandular tissue, the other is all muscular stroma
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1426 |
Testis
|
PAXgene |
1
|
2 pieces, 8x6 & 8x7 mm; good spermatogenesis
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1526 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 9x3.7 mm;
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 16.7x9 & 10.7x8.6 mm; large central holes in both (inadequate fixation); only outer ~1.5 mm preserved for molecular studies
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1726 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 9x7 & 9x8 mm
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 3x2.5 & 4x1.8 mm; clean (no adipose tissue); mildly elevated intimal plaques
|
Acceptable
|
 |
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1926 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 4x4 & 3x3 mm; 10% peripheral fat in 1; <5% in other.
|
Acceptable
|
 |
GTEX-R55D
|
51-60
|
Male
|
GTEX-R55D-0126 |
Testis
|
PAXgene |
1
|
2 aliquots. Spermatogenesis present
|
Acceptable
|
 |
GTEX-R55D
|
51-60
|
Male
|
GTEX-R55D-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces. Squamous epithelium is -2-3% of thickness
|
Acceptable
|
 |